Labeo rohita (rohu): 127183026
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Entry
127183026 CDS
T09007
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127183026 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127183026 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127183026 (snw1)
Spliceosome [BR:
lroh03041
]
Complex B
Other components
Prp19-related factors
127183026 (snw1)
Complex C
127183026 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
127183026
NCBI-ProteinID:
XP_050994776
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All DBs
Position
20:3518848..3526774
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AA seq
536 aa
AA seq
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MSLASFLPAPTQLTQDQLEAEERSRVQRSQSTALVSTRREPPPYGFRKSWVPRALEDFGD
GGAFPEIHVAQYPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVVFSKYTDML
PKEVLNEDDPELQKPDEEAVKELTEKTRTALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHGDKGGEDTEVRERDEIRHE
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDEVYNVYDQPFRSGRDMAQNIYRPSKNADKEMYGDNLDTLMQSNRFVPDREF
SGADHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcgagttttctccctgcacccacccagctgacccaggaccaactggaggca
gaggagaggtcgcgtgttcagaggtcccagtccactgctttggtctccacccgtagagaa
cctcctccttacggctttagaaaatcatgggttcctcgagcactagaggactttggagat
ggaggagcttttccagagatccatgtggcccagtatcctctagaaatgggtaggaagaaa
agaacctccaatgctctggcagtgcaagtggatgcagagggcaagatcaaatatgacgcc
attgctagacaaggtcaaaacaaagacaaggtcgtgttcagtaaatacacagacatgctt
cctaaggaagtgctaaacgaagatgatcctgagctgcagaaacccgatgaagaggcagtt
aaagagcttacagaaaagaccagaacagctctggagaaacaggtctcgcagaaaattgca
gcagccatgcctgtacgtgctgcggacaaacaggccccagcacaatatatcaggtacacg
ccttcacagcaaggacttgcatttaactccggagcaaaacagagagtcatccgtatggtg
gaaatgcagaaggatccaatggaacctccgcgattcaaaatcaataagaaaattccacgt
ggacctccatcccctcctgctccagtcatgcactctccaagcagaaagatgacagtgaaa
gaacagcaggagtggaagattccaccttgtatatccaactggaagaacgcaaagggttat
accattccactagacaagcgattggccgctgacggacgaggacttcaaaccgtccacatc
aatgagaactttgccaaactggctgaggctttgtacattgcggacagaaaggccagagag
gctgtggagatgagagctcaagtggaaaagaagatggcccagaaggagaaagaaaagaaa
gaggagaagctcagagagctggctaaaatggcaagggacaggagagctggtatcaaagcc
cacggtgacaaaggtggtgaggacacagaagtcagggagcgtgacgagatccgtcacgag
aggaggaaagaaaggcagcatgacaggaacatctccagagccgcccctgataagaggtca
aagttacaaagagatcaggacagggacattagtgaactcattgccctgggccagccgaac
ccccgtacctccagtgaggctcagtatgatcagagactcttcaaccaaagcaagggaatg
gacagtggttttgctggtggagaagatgaggtgtataatgtttatgatcagcccttcaga
agtggcagagacatggcacagaatatttacaggcccagtaagaatgcagataaggagatg
tatggagacaacctggacacactcatgcaaagcaacaggtttgttcctgatagggagttc
tcaggtgctgaccacggcccccgacgggatggccctgtgcagtttgaggaggatcctttc
ggtttggacaagttcttggaagaagccaaacagcacggaggctccaaaagggcgtccact
agtgggcgctccaaagactacgatcatgagaagaaacgcaggaaggagtga
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