Labeo rohita (rohu): 127183082
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Entry
127183082 CDS
T09007
Symbol
zyg11
Name
(RefSeq) protein zyg-11 homolog
KO
K10350
Zyg-11 protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127183082 (zyg11)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
127183082 (zyg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
LRR_EndoS
LRR_At5g56370
CILP_8th
Motif
Other DBs
NCBI-GeneID:
127183082
NCBI-ProteinID:
XP_050994856
LinkDB
All DBs
Position
20:complement(8069526..8088878)
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AA seq
738 aa
AA seq
DB search
MDEASPPSLTDLCMTLVSSRLELFCEKRDDGSLFFREPLVFPQELADQLLCKMATEGLLN
DSTVGIFRGGQQFRLRHAYIRTARISAEAFHRALCPHRLVELDASRVNADLTIADILRGL
SSNKTVVEGLQRLVLNGLTMSSLEEPSRRLFSAMQGLRALSVSNVDFYDSGLVDVCALPR
LESLDISNTSVTNLTPLLGLRSRLRYLTMHQLKRLEMTTAQLLAVLSQLEVLQHLDISDD
KQFTSDVARQLLETPGILPQLVSLDVSGRKQVTDAAVRAFVEARPGMTFVGLLATDAGFS
DFLSGEGSLKVTGEANETQICEALRRYSEREGFVREALFHLFSLTHAIEKPRPDILKLVA
LGMKNHPTTLNVQLAASACVFNLTKQELAFGIPVRLLGNVTQLLLEAMKTFPNHQQLQKN
CLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLSTEQTAQL
GAELFIVKQLLHIVRQKTCQGIVDATLKFTLSALWNLTDESPTTCRHFIENQGLELFIKV
LESFPSESSIQQKVLGLLNNIAEVGELHGELMVQSFLDHIRSLLHSPEVEVSYFAAGILA
HLTSRGEKVWTLDLSLRTTLLEQLHSAILKWPTPECEMVAYRSFNPFFPLLECFQTPGVQ
LWAAWAMQHVCSKNAGRYCSMLLEEGGLQQLEAVRSHPKTHSDVHRLAESILDSLHRHRA
RTGFTGPPKVPTQREKRL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcttccccgccatctctgaccgatctgtgcatgactctggtgagctccagg
ctggagctgttctgtgagaagcgtgatgacggctcgctcttcttccgtgagccgctggtc
ttcccgcaggagctggccgaccaactgctctgcaagatggccactgagggcctgttaaat
gacagcacagtgggaatcttccgaggcggccagcagttccggttgcgccacgcctacatc
cgcaccgcccgaatctccgccgaggccttccaccgtgccctctgcccgcaccgcctcgtg
gagctagacgcttcacgggtcaacgccgacctcaccattgccgacatccttcgaggttta
tcatccaataaaacggtggtggagggtctgcagcggctcgtcctgaacggcctgaccatg
tcttctctggaggagcccagccgtcgcttattcagcgccatgcagggactgcgtgcgctc
agcgtgtccaacgttgacttctacgactcgggcttggtggacgtgtgcgcgctgcctcgt
ctggagagtctggatatctccaacacctcagtgaccaacctcacccctctcctgggcttg
agaagcaggctacgctacctcaccatgcaccagctgaagaggctggaaatgaccactgct
caactgctagctgtgctcagtcagctggaggttttacagcaccttgatatctcagatgat
aagcagttcacgtccgacgtggcacggcagctgctggagactcctggcatcctgccccag
ctggtgtctctggatgtgtctggacgcaaacaggtgactgatgcagcggtcagggctttc
gtggaggcgagaccgggcatgaccttcgttggtctgctggccaccgatgccggattctct
gacttcctgtctggagaaggcagcttaaaggtgactggcgaagccaatgagacccagatc
tgtgaggctttgagaagatacagcgagagagaaggatttgtcagagaagctctcttccac
ctcttcagcctcactcacgccatcgagaaaccacgacctgacatcctaaagttggtagcg
ctggggatgaagaatcatccaaccacactgaacgtgcagctggcagccagtgcctgtgtg
ttcaacctcaccaaacaggaactggcctttggaatcccagttcgactcctggggaatgtc
acacagctgctacttgaagccatgaagacattccccaaccaccagcagctgcagaagaac
tgcctgctttctttatgcagtgaccgaatcttgcaggaggttccctttaacaggtttgaa
gctgccaagctggtcatgcagtggctgtgtaaccacgaggatcagaacatgcagaggatg
gccgtagctattatctccatcctagctgccaagctgtctactgagcaaactgcacaatta
ggagctgagctttttatcgtaaagcaactcctgcacattgtgcggcagaaaacgtgtcag
ggtatcgtggacgccacgttgaagttcacactcagcgctctgtggaacctcacagatgaa
tctcctaccacctgcagacacttcatagagaaccagggactagagctcttcatcaaagta
ctcgagtcgtttccatcagagtcgtccattcaacagaaagtcctcggtttactgaataat
atcgcggaggtgggggagttgcacggtgagctgatggttcagagttttttggatcatatt
cgctctctgctgcacagtccagaggtggaggtcagttattttgccgcaggcatattggcc
cacctcacctcacggggcgagaaggtgtggaccctcgacctgtcactcaggaccacgctg
ctggagcaactgcattcggcgattctgaagtggccaacgccggaatgtgagatggtggca
tacaggtcattcaaccctttcttcccattactggagtgtttccagaccccaggcgtccag
ctgtgggccgcctgggccatgcagcacgtctgcagcaaaaatgcggggcggtactgcagc
atgttactagaggagggaggactgcagcagctcgaagccgtgaggtcacaccccaaaacc
cacagcgacgtgcaccgattggccgaaagcatcttagacagtttacatcgccatagagcg
cgcacaggattcacagggccgcccaaagtacccacacagagagaaaaacgtctctaa
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