Labeo rohita (rohu): 127183106
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Entry
127183106 CDS
T09007
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127183106 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lroh04050
]
127183106 (tnfrsf21)
04090 CD molecules [BR:
lroh04090
]
127183106 (tnfrsf21)
Cytokine receptors [BR:
lroh04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
127183106 (tnfrsf21)
CD molecules [BR:
lroh04090
]
Proteins
127183106 (tnfrsf21)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
CARD
Motif
Other DBs
NCBI-GeneID:
127183106
NCBI-ProteinID:
XP_050994880
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All DBs
Position
20:complement(23221923..23255137)
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AA seq
635 aa
AA seq
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MPGKMSMTWSLIMLLFTAVSDVLTHTLTPSPTTEKPLSPRHYHHIDPTTGNKLVCDKCPA
GTYVSSHCTEASVRECSPCPDGTFTRGENGVQQCHRCQRRCQAPFVEKTPCTSTTDRSCV
CPPGSFSQGGKCQRYSLCPPGWGVRKRGSETEDVRCRACQRGTFSNVASDALRCQSHTDC
SSLGLTLLIKGTEKTDSVCGPTPASSVHVLLGEATVSSTESAYRASTAVLPVTEIQDVAG
PVLSSTDAALDDENIPTTTASSKTSDEDGGLLTSATQDFPKLQNKLSLSRDPQLANQQAM
EALSEGKAQSLGYRPIRRGAPRPSTHKHFDINEHLPWMIVLLLLLVLVVIVVCSVKRSSR
VLKKGPRQDPSSIMEKAIHKKPSSPAQTKERWIYYSNGQGVDILKLVAAQIGSQWIDMYK
SLASATEREVAAFSNGYSADHERAYAALQHWTIRDSDANLAKLINALHRQRRIDVVDKIR
SVMEDNPQVDLNKLMTAVNVNHCLSPSHKPFESPGVVVEQSPMERTKGFFTDESEPLLRC
DSTSSKDSALSRTGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHILNPEELHVIEEIPM
AEDRLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaaaatgtcgatgacttggtcgctgataatgctgctgttcactgcggtcagt
gacgtcttaacccacacactgacccccagccccaccacagagaagcccttgtctcctcga
cactaccaccacatcgaccccaccactggtaacaagctagtgtgcgacaagtgtccggcg
ggcacctacgtgtcctcccactgcacagaggccagtgtacgggaatgcagcccctgcccc
gacggcaccttcacccggggtgagaacggtgttcagcagtgccaccgttgtcagagacgc
tgccaagccccatttgtcgagaaaactccctgtacatccaccaccgatcgctcgtgtgtc
tgtccgccaggcagcttctcccagggtggaaagtgtcagcggtattcattatgtcctccg
gggtggggcgtccgaaagcgagggagtgagacagaggatgtgcgctgccgggcatgtcag
cgtggcaccttctccaacgtggcatcagatgccctgaggtgccaatctcacacagattgc
tcgtctctgggcttaacgctgctgatcaaaggcacagaaaagacagatagtgtgtgtggg
ccaactcccgccagttcggtccatgtcctacttggagaggccactgtttccagcactgag
tcagcatatagagcaagtactgcagttttaccagttacagagattcaggatgtagccggg
ccggttctcagtagcacagacgcggccctcgacgatgaaaacattcccacaaccacagct
tcctccaagactagtgatgaagatggcggactcttaacctctgcaactcaggacttccct
aaattgcaaaacaagctttccttatcaagagaccctcagcttgccaaccaacaggccatg
gaggctctgtctgagggcaaggcccaaagcttgggctaccggcccatccgcaggggtgcg
ccgaggcctagcacgcacaagcactttgacatcaatgagcacctgccttggatgattgtc
ctgctgcttctgctggtgctggtagtgatcgtggtgtgcagcgtaaagcgcagttcgcgg
gtgctgaagaaggggcccagacaagatcccagcagcatcatggagaaagccatccacaag
aagcccagctctccagcacagaccaaggagaggtggatctactactcaaatggacagggt
gttgacatcttgaagctggtggcagcacagattggcagtcagtggattgacatgtataag
tctctggccagtgctactgagcgagaggtggccgccttttccaacggatactcagctgat
catgagagggcgtacgctgctctgcagcactggaccatacgtgacagcgacgccaacctg
gcaaagctgatcaatgcccttcaccggcaacgccgcattgacgtggtggacaagatacgt
agcgtcatggaagacaatcctcaggttgacctgaacaagctaatgacggctgtgaatgta
aatcattgtctgagccccagccataagcctttcgagtcgcccggtgtggtggtggagcag
tcccccatggagcgcaccaaaggattcttcaccgacgaatcagagccgctgctgcgctgt
gactccacttccagcaaggactctgccctcagccgaacaggctctttcataaccaaagag
aaaaaggacacggtgctacggcaggtgcgtctagacccctgtgacctgcagcccatcttc
gacgatatgttgcacattctcaaccccgaggagcttcatgttattgaggagatcccgatg
gcggaggacaggctggaccgcttgtttgagattgcgggagtaaagagtcaagaagcaagc
cagacgctgcttgactcggtctacagccacttgcctgacctactttag
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