Labeo rohita (rohu): 127183110
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Entry
127183110 CDS
T09007
Symbol
wdr21
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain 21
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127183110 (wdr21)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127183110 (wdr21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40_CDC20-Fz
ASA1
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
DSE1_N
PAC11
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
127183110
NCBI-ProteinID:
XP_050994885
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All DBs
Position
20:complement(18320487..18328221)
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AA seq
496 aa
AA seq
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MKRGNWRSSGRDRHRHSHSRSRHRSTHDDQEYSSDSTAGDAGSSSASSSAPELPGFYFDP
EKNRYFRLLPGHNNCNPLTKEGLQKKEEEKKRSALLAEDDGPRNKAPRTGLNSALLLQKR
HLGLLPPSSYSRLIHEVKVSGMQRHRVEVQSSNSTCPNTDNFHLIVADSACERVFTVNDV
SHGGCKYGIMNFHGCRKGSLSVEMCDNLYFTNRKVNSVCWASVTHTDSHVLLCLVGISQT
PGCVSLLPASLFSNFNPDQPGMLCSFKISTAWSCAWCLNPQADKTFSTGLSRRVIVTDAV
TGRRATYLAGSDVLAQQFALRAPVLFNGCRSGEIFSIDLRQRDRGRSHGWKTSRFFQESA
ITSVQLLQDENYLLAADMLGKIKLWDIRVKRTVKQYEGHHNEYAYLPIHVNEPEGLLLAV
GQDCYTRLWSLQDSCLLRTIPSPHPAGKDSIPNVVFSPQLGGSRGLPGLLMAVRHDLYYY
TYNKDYQDGLTLEGQC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggggaactggcgatcgagtggcagggaccgtcaccgtcattcacactcgcgg
agcagacaccgttcaacccacgatgaccaggaatatagttctgacagcacagcaggtgat
gcaggttcatcctcagcatcctcatctgcaccagagttgccaggtttctacttcgaccca
gagaaaaaccgctactttcgtttgttgcctgggcacaacaactgtaacccactgacaaaa
gaagggctccagaaaaaggaagaggagaaaaagagatccgctctgctggcagaagatgat
ggtcctaggaataaagctccaaggactgggctcaattctgcattgctgttacagaagaga
catctgggtctgctgcccccaagctcctattctaggctgatccatgaagttaaagtcagc
gggatgcaacgtcacagggtggaagtgcagagctctaactccacctgcccaaacacagac
aacttccatcttattgttgcagattcagcttgtgaacgagttttcacagtaaatgatgtg
tcgcacggaggctgcaagtatggcattatgaatttccacggctgcagaaaaggctctctg
tcagtggagatgtgcgataacctctattttactaaccgcaaggtgaactctgtatgctgg
gcgtctgtgacacatacagactcacatgttctgttgtgtttggtgggcatttctcagact
ccaggctgtgtaagcttattacctgcttctcttttcagcaacttcaatccagatcaacca
gggatgctgtgcagttttaagatctccacagcttggtcatgtgcatggtgcctcaaccca
caggctgataaaaccttcagcactggcctttctcgacgagtgattgtgacggatgctgtg
actggacgtagagcgacgtaccttgcaggcagtgatgttctagctcaacagtttgccttg
agggctcccgtgctgttcaacggctgtcgctcaggagagatcttcagcattgacctgcgt
cagcgtgacaggggtcgcagtcacggttggaagaccagccgcttcttccaggagtcagca
atcacctcggtccaactgctacaggatgagaactacctcctcgctgctgacatgctgggc
aagataaagctgtgggacatccgtgttaagcggaccgtcaaacaatacgaaggacaccac
aacgaatacgcctacctacccattcatgtcaatgagccagaaggattgctgcttgctgtg
ggtcaggactgctacacccgactctggagcctccaagacagctgtcttctcaggacgatc
ccctcacctcaccccgcagggaaagactcaattccaaatgtggtgttttccccccagctg
ggtggtagtagaggacttcctggacttcttatggctgttcgtcatgatctgtactactac
acttacaacaaagactatcaggatggactaacactggagggtcagtgctaa
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