Labeo rohita (rohu): 127183112
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Entry
127183112 CDS
T09007
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127183112
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127183112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
127183112
NCBI-ProteinID:
XP_050994893
LinkDB
All DBs
Position
2:15427061..15428398
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AA seq
218 aa
AA seq
DB search
MNSMNMVKQPLEHIKRPMNAFMVWSRGQRRQMALENPKMHNSEISKRLGAEWKLLSESEK
RPYIDEAKRLRAQHMREHPDYKYRPRRKPKGLVRKDALLSFPYEAISDLDKPRPLQRSFV
EPSRSAVTTATAAFQHEKLALTPGSLAFSPAFGYQSGHRSFGSLGCSGQYAHTQLSPANP
GYLLPCNCSPWSSPSLTPPVAYLVFPGMSKNAISSTAL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgatgaacatggtgaagcagcccctggagcacatcaagagaccaatgaacgcg
ttcatggtctggtcgcgaggtcagagaagacagatggcactggagaacccaaagatgcac
aactcagagatcagcaagagactcggtgccgagtggaagctgctctccgagtctgaaaag
agaccttacatagacgaagccaaaagactacgcgcccaacacatgagagagcatccagat
tacaaataccgaccgagacgcaaacctaaaggactggtaaggaaggacgcgctgttgtct
tttccgtatgaagctatctcagatttggacaaaccgcgaccccttcaacgttctttcgtg
gagccgagccgctcagctgttactacagctaccgctgcttttcaacatgaaaaacttgcg
ttgaccccgggctcgttggctttctctccagcttttggctatcagagcggacaccggtcc
ttcgggagtctgggatgctccggtcagtacgcgcacactcagctgtcacctgcaaacccc
ggatacctgctgccctgtaactgttctccctggtcctctcccagtctcacacctccagtt
gcctatttagtgtttccaggtatgagtaagaatgcgatcagctccacagcgctgtga
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