Labeo rohita (rohu): 127183206
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Entry
127183206 CDS
T09007
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
lroh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127183206 (yy1b)
03083 Polycomb repressive complex
127183206 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127183206 (yy1b)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127183206 (yy1b)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127183206 (yy1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127183206 (yy1b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
127183206 (yy1b)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
127183206 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
INO80_Ies4
Raffinose_syn
MAM
IBR
Motif
Other DBs
NCBI-GeneID:
127183206
NCBI-ProteinID:
XP_050995068
LinkDB
All DBs
Position
20:complement(33550707..33557000)
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AA seq
403 aa
AA seq
DB search
MASGETLYIETDGSEMPAEIVELHEIEVETIPVETIETTVVGGDDDDDEDDDDDDDDDDD
DDEHQPMIALQPLVTDDPSQVHHHHHHHHHHHQEVILVQTREEVVGGDESDLRADDGFED
QILIPVPAPGAEEEYIGQTLVTVAGKSSAGRLGKKSGSGGKKAGKKSYLSAAEASGRKWE
QKQVQIKTLEGEFSVTMWASDDKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIP
GIDLSDPKQLAEFASPFSNSRAHFARSPVRMKPRKIKEDDAPRTIACPHKGCTKMFRDNS
AMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR
THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggcgaaacgctgtacatcgagacggacggctcggagatgcccgcggagatc
gtggagctgcacgagatcgaggtggaaacgattcccgtggagaccatcgagaccacggtg
gtcggcggcgacgacgacgacgacgaagacgacgacgacgacgatgatgatgatgatgat
gatgatgagcaccagcccatgatcgcgctgcagccgctggtgacagacgacccgagccag
gtccatcaccaccatcaccatcaccaccaccaccaccaggaggtgatcctggtccagacc
cgggaggaggtggtcggcggcgacgagtcggacctgcgggcggacgacggcttcgaggac
cagatcctcattccggtgccagcgcccggcgcggaggaggagtacatcggccagactctg
gtgacagtcgcgggcaagagctccgcggggcggctgggcaagaaatcgggctcgggaggc
aagaaagcgggcaagaagagctacctgagcgcggccgaggccagcgggagaaaatgggag
cagaagcaggtgcagatcaagaccctggagggcgagttctccgtcacgatgtgggcttcg
gatgacaagaaggacatcgatcatgagacggtggtggaggagcagatcatcggggaaaac
tctcctccggattattccgaatacatgacgggaaagaagctcccgcccggcggaatcccg
ggaatcgacctgtcagaccccaaacagctggcggagttcgccagccccttcagtaacagc
agagctcattttgctcgtagccccgttcggatgaagccgaggaagatcaaggaggacgac
gcgcctcgaacgatagcctgcccgcacaaaggctgcactaaaatgttcagggataattca
gccatgaggaagcacctccacactcacggcccgcgggttcacgtgtgcgccgagtgcggg
aaagccttcgtggagagctccaaactaaagcgccatcagctggttcacaccggagagaag
cccttccagtgtacgtttgagggctgtgggaagcgtttctctctggactttaacctccgg
acgcacgtccggattcacaccggggaccggccctacgtttgcccgtttgacggctgcaat
aaaaagttcgctcagtccaccaacctcaaatcacacatcctgacacacgccaaagccaaa
aacaaccaatga
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