Labeo rohita (rohu): 127183240
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Entry
127183240 CDS
T09007
Name
(RefSeq) transcriptional repressor p66-alpha isoform X1
KO
K23194
transcriptional repressor p66
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127183240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127183240
03036 Chromosome and associated proteins [BR:
lroh03036
]
127183240
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127183240
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
127183240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
FYVE
Motif
Other DBs
NCBI-GeneID:
127183240
NCBI-ProteinID:
XP_050995133
LinkDB
All DBs
Position
2:complement(39460554..39481144)
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AA seq
603 aa
AA seq
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MSEDAVRQTRSQKRALERDSLPADGKRLKLDGVERSRSETAVAVQSSSILKATIKVEVQT
GDEPMDMSNTSVKREARSPSPDDVIVLSDEAPSPQVNGGNHLKELDTDLLMRSSPEEREH
VIKQLKEELRLEEAKLILLKKLRQSQIHKESSVQKPAAPVSSAPPPLVKGSATGKTTQPV
ISARASGTVIPPPLVRGNQLSKHGSTGAQIIMPPLVRGAQSISVSPQQISSLRQQQNSSS
GPPPLLLAPRATVSSVAGQKIIQPGLIRMTTIPSTGLLVSINQATGSNLKTGSSVLNAGQ
SPDGRQAAKLALRKQLEKTLLEIPPPKPPMPQLNFLPSAANNEFIYLVGLEEVVQNLLES
LGRGKQGLYAGLVVSGGEPSCCSQCKTDFTCRWRRDKGGAVMCEQCMSSNQKKVLKAEHT
NRLKAAFVKALQQEQELDKRVLQQATSPASSSSSSSHGMKVDQVKARSSSLVQQTQGRAV
QTVSRHIATIKQVSQSPSARSVQPSAIRAVPHSFSPSSQLQNAVAAAALVNRPGKHAERQ
GSKVSSSRGSGVRKRSSGAAGVTMAYVNPSLSVHKPSAVERHREYLLDMIPSRSISQAAN
TWK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggacgcggtgcggcagacgcgcagtcagaagcgtgcgctagagcgggactct
ctgcccgcggacggtaagcggctgaagctggatggcgtggagcgctcccgatcggagacg
gccgtggcggtccagtcctccagcatcctgaaggccaccatcaaagtggaggtgcagaca
ggagacgagcccatggacatgagcaacacttcggtgaagagagaggcgaggtctccgtcg
cccgatgatgtgatcgttctgtcggacgaggcgcccagtccacaggtgaacggaggaaat
cacctcaaagagctggacacggatctgctgatgaggagttctccagaggagcgtgagcac
gtcattaagcagctgaaggaggagctgcgtttagaggaggccaaactcatcctgctcaag
aaactcagacagagtcaaatacacaaagaatccagcgtacagaagccggcggctcctgtg
tccagtgcgcctcctcctctggtgaagggatctgctactgggaaaaccacacaacctgtg
atctctgctcgggcttctgggacggtgattcctcctccgctggtgcgcggcaatcagctg
tccaaacacggctcgaccggcgctcagatcatcatgcctccgctggtcagaggagctcag
tcgatctcggtgtcgccgcagcagatctccagcctgagacagcagcagaactcgtcttcg
ggtcctcctcccctgctcctcgctcccagagccacggtgagcagcgtcgcgggacagaag
atcatccagcccggcctcatacgcatgaccaccatccccagcaccggcctgctggtcagc
atcaaccaggccaccggctcaaacctgaagaccgggtcgagcgtgttgaacgccggtcag
tctccagacggtcgtcaggcggccaaactagcgctgcgcaaacagctggagaagacgctg
ctggagatcccgccgcccaaaccgcccatgccgcagctcaacttcctgccgtcggcggcc
aataacgagttcatctacctggtggggctggaggaggtggtgcagaacctgctggagtct
ctgggacgaggtaagcagggtctgtacgcgggtttggtggtcagcggtggagagccgtcc
tgctgctctcagtgtaagacggacttcacctgccgctggcgtcgagataaaggcggagcc
gtcatgtgtgagcagtgcatgtcgtccaatcagaagaaggtgctgaaggccgaacacacc
aatcgtctgaaggcggcgttcgtcaaggcgcttcagcaggagcaggagctcgataagcgc
gtgctgcagcaggccacgtcccccgcctcttcatcatcatcatcctctcacgggatgaag
gtcgatcaggtcaaagcgcgctcctcctctttagttcagcagacgcagggacgcgccgtt
cagaccgtgagccgccacatcgcaaccatcaaacaggtgtctcagagtccgtcggcccgt
agcgtgcagccgtccgcgatccgcgccgttcctcactcgttctccccgtcctctcagctg
cagaacgccgtggcggccgccgctctggtcaacaggccaggtaagcatgcagagcgtcag
gggtcaaaggtcagcagcagcagaggcagcggcgtgaggaaacggagcagcggcgccgca
ggtgtgactatggcctacgtgaaccccagtctgtctgttcataagccgtctgcggtggag
cgtcacagagagtatctgctggacatgatcccgtcccgctccatctcacaggccgcaaac
acctggaagtaa
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