Labeo rohita (rohu): 127183343
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Entry
127183343 CDS
T09007
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03410
Base excision repair
lroh04210
Apoptosis
lroh04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127183343 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127183343 (parp1)
04217 Necroptosis
127183343 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127183343 (parp1)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127183343 (parp1)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127183343 (parp1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
127183343 (parp1)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127183343 (parp1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127183343 (parp1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127183343 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
127183343
NCBI-ProteinID:
XP_050995285
LinkDB
All DBs
Position
20:27696323..27716625
Genome browser
AA seq
1016 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDTLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSPSDISGFTDLRWDDQEKVKKAIESGGATGGKGGQKGAAKGEKSLNDFAVEYAKS
NRSTCKGCDQKIEKDHIRVSKKTVDPEKPQLGLIDRWYHTGCFVSRREELLFKPEYSATQ
LKGFAALRDEDKEELKKRLPAVKNEGKRKADEVDGGVSKKQKKEDEKLELKLKEQSQLIW
GIKDKLKKFCSVNDMKELLIANNQEVPSGESNILDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPKEFSEIPFLKKFKFKRQDRMFPKDAPQAAP
THSSAAATATSAALSASAAASNNLTEVPADKPLTGLKLLAVGKLSKNKDELKNIVEGLGG
KITGTANKAALCLSSKKEIEKMSKKMEEVRDAGVRVVAEDFLTDIKESGKALQELISLHA
ISPWGAEVKIESQAAAPASKSTGAHSSKSTGKVKEEEGGSKSKKMKLTVKGGAAVDPDSG
LENCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVKKQYWVFRSWGRVGTTIGG
NKLDKFYDKNSAMDNFCSVYEEKTGNAWGSSNFTKYPNKFYPLEIDYGQDEEAVKKLTAS
AGAKSKLDKPIQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQ
AVTDNAAEAQILDLSNRFYTLIPHDFGMKKPPLLNNMDYIQQKVQMLDNLLDIEVAYSLL
RGGVEDNKKDPIDINYEKLKTKIEVVDKSSSEAQLIQQYVKNTHAATHNTYTLDVEEIFK
IDREGESQRFRPFRELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFA
DMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDQ
RATVSLNGVDVPLGKGVNTNIEDTSLLYNEYIVYDIAQVNLKYLLKIRFNYQTSLW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcacaggatgacaaactctacaaagccgaatatgcgaaaagcggacgcgcc
tcctgcaagaaatgcaaagaaaacattgctaaagacacgctgagaatggccattatggtg
cagtctcccatgtttgatggcaaagtgcctcactggcaccatttttcctgcttttggctc
cgtgctgcggtacagtcgccctctgacatctctggatttactgacctccgctgggatgac
caggagaaagtgaagaaagccattgagagtggaggtgctactggaggtaagggggggcag
aagggagcagctaaaggcgagaagtcgctgaatgactttgcagtggagtacgccaaatcc
aacagaagcacctgcaaggggtgtgatcaaaaaatcgaaaaggaccacatacgtgtgtca
aagaagacagtggacccagagaaacctcagcttggcctaatagatcgctggtatcacact
ggctgctttgtgagtcgccgtgaggagctattgtttaagccagagtacagtgccacccag
ctcaaaggtttcgcagctctgcgagatgaagacaaggaggagctgaaaaaaagacttcct
gcagtgaagaatgaagggaagagaaaagcagatgaggtagatggaggtgtctccaaaaaa
cagaagaaagaagatgaaaaactggagctgaaactgaaggagcaaagccagctgatttgg
ggaattaaggacaagctaaagaaattctgctccgtcaatgatatgaaggagctgcttatt
gccaacaatcaagaagttccctctggggagtcaaatatcctagaccgactttcagattgc
atggcttttgggtccttaaagccttgtgagacttgcaaagggcagcttgtgtttaagagt
gatgcatactattgtactggggacatctctgcatggaccaagtgtgtattcaagactcag
acacctgatcgtaaagattgggtcactcctaaggagttcagtgagattccattcctgaag
aaatttaagtttaaacggcaggaccgtatgtttcccaaagatgcccctcaggctgctccc
acccactcgtctgctgctgctactgcgacctcagctgccctgagcgcgtctgctgctgcc
agtaataacctcactgaggtgcctgcagataagcctttaacaggactgaagctgctggct
gtgggaaagcttagtaagaacaaagacgagctgaaaaatatagtggaaggactgggagga
aaaatcacaggcactgccaacaaagccgctctctgccttagcagcaaaaaggagattgaa
aaaatgagtaagaagatggaggaggtgagggacgcaggtgtgcgtgtggtggcagaggac
ttcctcactgacatcaaggagtccggcaaggcccttcaggagctcatctccctgcacgca
atctcaccctggggcgctgaagttaaaatcgagtcccaggctgcagccccagcttccaaa
tccaccggcgctcattcctcaaagagtactggcaaagtcaaggaggaagaaggtggaagc
aaatcaaagaaaatgaaactgacagtgaaaggaggggcagcagttgatccagactcaggt
ctggaaaactgtgctcacgtcctggatcagaacgggaagatttacagtgccacactgggt
cttgtggacatcgtcagaggaacaaactcgtactacaaactacagctgcttgaggatgac
gtcaagaaacaatactgggtgttcaggtcatggggtcgtgtcggcaccaccattggggga
aacaaactggacaagttttacgataagaactctgcaatggacaatttctgcagcgtgtat
gaggaaaaaactgggaatgcctggggctccagtaacttcacaaaataccccaataagttt
tatcctctagaaatcgactatggacaggacgaggaggctgtgaagaagttaactgcgagc
gcaggcgccaaatccaagctggacaaacctattcaagacctcatccgaatgatctttgat
gtggagagcatgaagaaagccatggttgagtttgagattgacttgcagaagatgcctttg
ggaaaactgagtaagcgacagatccagagtgcttattcccttttgagtgaggtccaacag
gctgtgacagataacgctgcagaagcacagatcttagatctgtccaatcgcttctacaca
ctgataccgcacgacttcggcatgaagaaaccaccactgttgaataacatggattacata
cagcaaaaggtgcagatgctggacaacctgttggacattgaggtggcctacagcctgctg
cgaggaggagtggaggacaataagaaagatcccattgatattaattatgagaaactcaaa
accaaaattgaggtggttgacaagtcatcaagtgaggctcagcttatccaacaatatgtg
aagaacacacacgctgctactcacaacacctacacactggatgtggaggagatctttaag
atcgacagggagggtgagtcccagcgtttccgtccattcagagaattgcacaaccggcag
ctgttgtggcacggctcccgcaccaccaactacgcaggtatcctgtctcagggtctgcgt
atcgctcctcctgaagctccagtgacaggttacatgtttggcaaaggtgtttactttgct
gatatggtgtcgaagagtgcaaactactgccacacatcccaggctgatcctgttggcctc
attttgttaggagaggttgcccttggaaacatgcatgaactgaagaaggcctctcacatc
acgaagttaccaaagggtaaacacagtgtaaaaggtttgggaagaactgctccagaccaa
agagctactgtatctctgaatggagtggatgttcctttgggcaaaggcgtcaacacaaat
attgaagacacaagtctgctctacaacgagtacattgtgtatgatattgctcaggttaac
ctgaaatacctgctgaagattcgcttcaactaccagacctctctgtggtga
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