Labeo rohita (rohu): 127183421
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Entry
127183421 CDS
T09007
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127183421 (trappc8)
Membrane trafficking [BR:
lroh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
127183421 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_4th
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
127183421
NCBI-ProteinID:
XP_050995412
LinkDB
All DBs
Position
20:10760195..10825209
Genome browser
AA seq
1481 aa
AA seq
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MAQCVQSVQEFIQDSFVPMVAVLCSEDAERVTRKNNLSFPELLRPFCRLTSEGHLRDPNN
QVVVVKGLRISVTGINTRPPQTPELQRLLSQAVSVCQPPEGSPANVITAGDYDLNISDRT
VKASVPWYSDWKETLTQLSSSKYYTATTPWFETYRENFLQSMPASEHEFLNHYLACMLVV
SSREAVPTEQFLKLSQEQHRIQHSGEYTHPKWFIPNTLKYYVLLHDISEGDEQRADSVYE
DMKQRYGTQGCYLLKINSRSGSTGADEQMPDPWSQYLHKTSIHNPELYEESAVTNAVENN
IGAEEDGLDPSIRDGVSEAHPLQLDQPTDVGYPGNNANQSVNNVDVTKPQKQASVTSHTT
PTPRGTCLTLNDHDHIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKL
FGGGKVPEKSIAELKNTAGLLYPSEAPELQIRKMADLCFLVQHYELAYNCYHTAKKDFLS
DQAMLYAAGSLEMAAVAAFLQSGAPRPYPAHYMDTAIQTYRDVCKNMLLAERCCLLSAEI
LKSQTKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRSPMVRKFAFHMILAGHRFS
KAGQKRHALRCYCQALQVYKGKGWTLAEDHINFTIGRQSFTLRQPENAVAAFRHILINDS
KQSAVQQAAFLREYLYVYKSMSQLSGDSSLPQLPLPCLHSSQTRVFFGHERRLAEGEKQA
ATHVSLDQEFDRDLSQLWRELEERVVAVANRGTVPNTFQPSQCCLNSQTDNLRYPLAVVE
EPIIVEVVFRNPLKVPLALSALSLLWKFTLKDFSGPQGGTAGETISNEKEAASLKETTAL
NDIIDTQVIPEFTISPEETKVARLKLLPHKTGELHVLGVVYNLGTGEVGNSEGSLGGDVM
CVRGQQNLEIQGPRLNMTKEEKTSVRYGPDRRLDPIITPPMPLLEVFFINFPTGLLCGEI
RKAWVEFVNVSAVPLTGLRVASTHPEFFTFGSAASDLTPVTPTAAEHCSAYKTVAVPPSM
ATVSLVSPAAFGVTGGDRPVVVEIPLSQGVLGPGEALQIPLWLRGPDREGVHEINFLFYY
ESTEKTAKLSHRVLRHTVFICASRSLSVRATASRSNTLHARERETEERQEGEEKNGSMLV
FVDVENINTSEAGVREFHIVQVSSSSRQWRLHKCINPVGDKDSKLASRERGKLCFKATRC
RMEEVTSDAVEKYTFADLNLGNEQIVSSTTPCADFFFRRGLPSEPRRGGVSAGGASQMRR
QSLTPQSGTGDGVTSIVKKCSEVELDIIILWKAYVVEDNKQLILEGQLHVALQTIGKESC
SLSQKEETQEMVLLKFKPDVPPPVSKPSLEQLSHLIKTCLHYPESYDHPFPQKSLCMVPV
TLTLSNCSLAQVDVIVDLRHKTTSPESLEVHGSFSWLGQTQYKLQLQAQEVYRLSLKACF
FQAGVYNLGTPRVFAKLAQTSAMCETSQQSAMPALIIINSV
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtgcagtcagtgcaggagttcatccaggactcgttcgtgccgatggtg
gccgtcctgtgcagcgaggatgcggagagagtgacccgcaaaaacaacctgagtttcccc
gagctgctgcggcctttctgccgcctgacgtccgagggtcacttacgtgaccccaataac
caggtggttgtggtgaagggcctccggatcagtgtgactgggatcaacacacgacctcca
cagaccccagagctgcaaagactcctcagccaagcggtttctgtctgccagcctcctgaa
gggtcgcccgccaacgtcatcacggctggagactacgacctcaacataagcgaccgcacg
gtcaaagcgagcgttccctggtactctgactggaaagaaacactcacccagctgagctcg
tccaagtactacacagcaacaacaccatggtttgagacttaccgggagaacttcctgcag
tccatgccggcatcagagcatgagtttctcaaccactacctggcctgtatgttggtggtg
tcgtcccgtgaggcagtgccgacagagcagtttctcaagctgtcgcaggaacagcaccga
atccagcacagtggggaatacactcatcccaaatggttcatccccaacacactcaaatat
tacgtcctgctccacgatatcagtgaaggagacgagcagagggcggactctgtgtacgag
gatatgaaacagcggtatggtactcagggctgctatctgctcaagattaactccaggagt
ggtagcactggtgcagacgaacagatgccggacccctggagtcagtacttgcacaagacc
agcatacacaaccctgagctgtatgaggaatctgcagtgactaatgcggttgaaaacaac
atcggcgcagaggaagatggtcttgatccatccattagagacggcgtctcagaggctcat
cctctacaactggaccagcccactgatgttggttaccctggcaacaacgctaatcagtct
gtaaacaatgtggatgtgacgaaacctcaaaaacaggccagcgtgacctctcacaccacc
ccgacccctcgaggaacctgcctgaccctaaatgaccacgaccacatccggcagtttatc
caggagttcacctttagaggattactgccacacatcgagaagaacatacggcagctaaat
gaccagctcgtctcgagaaaaggcctgagccgatctcttttctccgccactaagaagttg
tttggtggagggaaggtcccagagaagagtattgctgaactaaagaacactgcagggctg
ctatatccctcagaggctccagagcttcagatcagaaagatggccgacctctgcttcctc
gttcagcactatgagctggcttacaactgctaccacactgccaaaaaggacttcctctct
gaccaagccatgctgtatgctgcgggatcgctggagatggctgccgtcgctgcttttctg
cagagcggggcacccaggccgtatccagcacactatatggacacggctattcagacatac
agagacgtgtgcaaaaacatgttattggctgagcggtgttgtcttttaagtgctgagatt
ttgaaaagtcagaccaaatactctgatgctgccacacttctgatcaagatgaccagtgag
gactctgatttgcggagtgcactcctattggagcaggcagctcactgcttcattaatatg
cgcagccccatggtgaggaagtttgccttccacatgatactggctggtcatcgtttcagc
aaagctggacagaagagacatgcgttgaggtgctactgccaggctttgcaggtgtataaa
ggtaaaggttggacactggctgaagatcacatcaacttcaccatcggtcggcaatccttc
actctgcggcagccggagaacgcagtggccgctttccggcatattctcattaacgacagc
aaacaatcggccgtacagcaagccgctttcctcagggaatacctctatgtgtataagagc
atgagtcagttgtctggtgacagctcgctcccgcagctgcctctgccctgcctgcacagc
tcacaaacacgtgtcttcttcggccatgagcgcagactcgctgaaggtgagaaacaagcc
gcaacacatgtctctttggaccaggagtttgaccgggatctttcccagctctggagggag
ttggaggagcgggtcgtcgctgtggcaaatagaggaacggtgcccaacaccttccagccc
tcccaatgctgcctgaacagtcagacggataatctcagataccccctcgccgtggtggag
gagcccatcattgtggaggtggttttccgtaaccccctgaaggttcctttagctctgtcg
gctctgtctctgctgtggaagtttactctgaaagacttctcaggccctcagggcggcaca
gctggagaaaccatcagcaatgaaaaagaggcagcgtctttgaaagaaaccacagccctc
aatgacatcattgatacgcaagtcattccagagttcaccataagtcctgaggagaccaaa
gtggctcgtttgaagttgcttcctcataagacgggagagttgcatgttctcggtgtggtg
tacaacctgggcaccggagaagtgggcaacagtgaaggctcactgggcggggatgtgatg
tgtgttcgtggacagcagaacctggagatccaggggcccagactcaatatgaccaaagag
gaaaagacttccgtcagatatggaccagaccgccgcttggaccccattatcactccacct
atgcccttactagaggtgtttttcattaacttccccactggtttattgtgtggtgagatc
cgaaaagcatgggtggagtttgtgaatgtgagcgcggtccctctcactggtcttcgcgtg
gcatccacacacccagagttcttcacattcgggagtgctgcctctgacctcaccccggtg
acccccacagcagcagagcactgttccgcgtacaaaactgtggccgtgcccccgtcaatg
gcgaccgtgtcgctcgtgtcaccggcagcattcggggtcaccggcggtgaccggccggtg
gtggtggagattcccttatcacaaggtgtgttgggacctggggaggcattacagatccca
ctgtggctcagggggcctgaccgagagggtgtccatgaaatcaacttcctcttttactat
gaaagtacagagaagactgccaaactcagtcacagggtccttcgacacactgttttcatc
tgtgcaagccgctctctcagtgtcagagccacggccagccgcagcaacacgctgcacgcc
agagagagagaaacagaagaacggcaggagggagaggagaagaacggcagcatgttggtc
tttgtggacgtggaaaacattaacacaagtgaagcaggtgttcgtgagttccatatagtt
caggtgtccagcagcagtcggcagtggaggctgcacaagtgcatcaaccctgtgggagat
aaagactctaagctggccagcagggagagggggaagctgtgcttcaaagccactagatgc
agaatggaggaagtgacctcagatgcagtagaaaaatacacctttgccgacctcaacctt
ggcaacgagcaaattgtcagctctaccactccatgtgctgattttttcttccggaggggt
ctgccttctgaacccaggagagggggcgtttccgcaggcggtgctagtcaaatgcgtaga
cagagcctcacgccacagagcgggactggtgatggtgtgaccagtattgtcaaaaaatgc
agtgaagtagagcttgacatcatcatcctttggaaggcatatgttgtggaggataacaaa
cagctgattttagagggccagcttcacgttgcactgcaaaccattggaaaagagtcctgc
tcactctcgcagaaagaggaaactcaggaaatggtgcttctgaagttcaagcctgacgtt
cctccccctgtaagcaagccctcgctggaacagctttcccacctcataaagacctgtctc
cactacccagagtcttatgatcatcccttcccacaaaagagtttatgtatggttccagtc
actctgacgttgtccaactgttccttggctcaggtagacgtcatcgttgatctgcggcat
aaaacgaccagtcccgagtcactggaagtgcatggatcttttagctggctgggccagacc
caatataagttgcagctccaggctcaagaggtgtacaggctttccttgaaagcttgtttc
ttccaggccggagtttataatttgggcacaccccgtgtcttcgccaagttggcacagacc
agcgctatgtgcgagacgagccagcagagcgccatgccggccctcatcatcatcaacagc
gtttga
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