Labeo rohita (rohu): 127183499
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Entry
127183499 CDS
T09007
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127183499 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
Patched domain-containing proteins
127183499 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
127183499
NCBI-ProteinID:
XP_050995534
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All DBs
Position
20:complement(23352345..23398837)
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AA seq
916 aa
AA seq
DB search
MCFIGRTGASSAASWIWRRMLRQVIHRGLKSSFYWLGLFVSRHPVFFLTVPAVLTIIFGS
TVLSRFKPETDLEILVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLA
KSGGNILELAEQVLQVHKKVLDMRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIR
LAVLSNSTFSKVPVSYPNTTLKDGRVSFIGHQLGGVALPANSRDQQVKFARAIQITYYLR
NLGPVVQDIISEKWESEFCKLVHQLATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVS
LVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFF
AMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTN
IESVKVFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPT
WFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFM
GCLQISDGSNIINLLASNSPSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKT
LGQGFNKISWIDNYFHYLRVVNVSASTKSDFINILKTSFLRSPEYQHFVDDIIFSKNGDE
YDIIASKMYLVARTTEKTREEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSIISP
ILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIY
TLNFAMDHCAPHLYTFVLATEHTRTQCIKMSLEEHGAAILQNTSCFVIGIMPLLFVPSNL
TYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREE
IECIEVRENPDHVTNV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaccggggcatcatctgctgcaagctggatctggaggaggatg
ctgcggcaagtgatacacagagggctgaaatcttctttctactggctgggtttgttcgtg
agcaggcatccggtgttcttcctcaccgtccccgcagtcctgaccatcattttcggatcc
accgtgctgagccggtttaagcccgaaacggacctggagatcctggtcgccccgacgcac
agcctcgcgaagatcgagcggagtctcgccaacagcctcttccccatcgaccagtccaag
cacaagctgtactcggacctgcacacccccggcagatatggcagactcattctgctggcc
aaatccgggggaaacatcctggagctggccgagcaggtgctccaggtgcacaagaaggtc
ctggatatgcgtgtcaattacaaaggcttcaattacactttcgcgcatctctgtgtcctg
agccaccgggacaagagatgcctcctggatgatatcatcaccatattcgaagacattcgt
ttagctgttctatctaacagcactttttccaaggttcccgtgagctacccgaatacaaca
ttaaaggatggtcgagtgtcctttattggccatcagctgggtggcgtggccttgcccgca
aatagccgggaccaacaagtcaagtttgctcgcgccatccaaatcacctactacctccgc
aaccttgggccagtggtgcaggacatcatttcagagaagtgggagagtgaattctgtaag
ctggtgcaccagttggctacagacagccaggaactacacatccagtcgcttacgtccttc
agcttatggcgggacttccacaagacaggcgtgctggccaagagcgaggtattggtcagc
ttggtgctggtgctcctggcagccaccatctccagctctatgcgggactgcttgcgcggg
aaacccttcctgggcctgttgggcgtccttaccatctgcatcgccaacgtgacggcagct
gggatttttttcatctctgatgggaaatttaactctacgctgcttgggatcccctttttt
gctatgggccacgggacaaagggtgtgtttgagctcctggcaggctggagaagaaccaga
gagagtttgcccttcaaggagagagtggcagatgctttcgccgacgtgatggtgtgctac
accatgaccagctcgctctatattatcaccttcggcatgggtgccagccctttcaccaac
atcgaatccgtgaaggttttctgccagagcatgtgtgtagcaatccttgtgaactacttc
tacgtattctcattctacggctcctgcctggtgtttgccgggcagctggagcaaaaccga
tatcacagcgtcttctgctgcaagatcccttcggtggagtatctggaccggcagcccact
tggtttaagaccatgatgagtgacggccatgatttgtctacacaccatgacagcgtaccc
taccagaaccacttcattcagcacttcctgagggagcattacacagaatggattaccaac
acctacgtcaagccttttgtggtaatcctctacctgatttacgcctccttttcgttcatg
ggatgtttacagatcagcgacggctccaacataatcaatctgctagctagtaattcgccc
agtgtgtcgttcgccctgacccaacagaaatactttagcaactacagtccggtgattggg
ttttacatctatgaacccattgagtattggaactccacagtgcaggagcacctcaagacg
ctgggccagggctttaataagatttcatggatcgataattactttcactatctgagggtc
gtgaatgtcagcgcgtcaaccaaaagtgattttattaacatcctcaagacttcttttctg
aggagcccagaatatcaacactttgtggacgacatcattttctccaaaaacggagacgag
tatgacatcatcgcatccaagatgtatctggtggccaggacgaccgagaagaccagggag
gaggtcgtagagctgctagagagacttcgaccgctctcccttataaacagcatcaagttc
atcgttttcaacccaacgtttgtgttcatggaccgctacagttcctccatcatctccccc
atcctaacgtcgggcttcagcgtgctcaccattctcatcctcaccttcttcctggtcatc
aacccactggggaacttctggttgatcttgaccgtcacctccgtggaactgggcgtcttg
ggtctcatgacgctctggaatgtagacatggacagcatctctatcctgtgccttatttat
actctcaactttgccatggatcactgtgccccccacctctacacgttcgtactggccact
gagcacacgcggactcagtgcatcaaaatgtctttagaggagcatggggccgccattttg
caaaacacctcgtgttttgtaattgggataatgcctcttctctttgtgccttcaaacctg
acctacacactgttcaagtgctcccttctcacagccggctgcacagtcctgcactgtttc
gtcatcctaccggtgtttttgacattcttcccgccctctaagaagcggcacaagaaaaag
aaacgcgccaaacggaaagagcgggaaagggagagggagcgggaaagggagagagaggaa
atcgagtgcatcgaagtcagggaaaacccggaccacgtgaccaatgtttga
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