Furfurilactobacillus rossiae: LROSL1_0711
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Entry
LROSL1_0711 CDS
T06823
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lros
Furfurilactobacillus rossiae
Pathway
lros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LROSL1_0711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lros03019
]
LROSL1_0711
03009 Ribosome biogenesis [BR:
lros03009
]
LROSL1_0711
Enzymes [BR:
lros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LROSL1_0711
Messenger RNA biogenesis [BR:
lros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LROSL1_0711
Ribosome biogenesis [BR:
lros03009
]
Prokaryotic type
rRNA helicases
LROSL1_0711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLE63531
LinkDB
All DBs
Position
804717..806276
Genome browser
AA seq
519 aa
AA seq
DB search
MKFAELGLNKALLKAIDDSGYEEATPIQAETIPLVMQGLDVIGQAQTGTGKTAAFGLPIL
DKIDTENPNVQALIVSPTRELAIQTQEELYRLGKHEHARVQVVYGGADIRRQINSLKNHP
QIVVGTPGRLLDHINRKTVRLDHVQTLVLDEADEMLDMGFVDDIESIIKQVPEQRQTLLF
SATMPDKIKRIGVQFMKEPHEVRIKAKELTTDLVDQFYVKSKEYEKFDLMTHLFDVQDPD
LTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLTQQRRSQILKQFRDGKLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGHHGTSLTFVTPNEMDYLREIEKLTKV
RMLPLKPPSVAEAFAGQLSAAENKVADLVKETDTSKFDKEATELLDRYDAEELVAALLSN
LTPGDEHDTPVHITPERPLPSRHGGGRGNGRGGRGHGGYRGNNRNGRNNRNSRERENGNR
GRFDHKSGSRNNSSRSNSSRNGGSSNHGGNKHGYSINHK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttgcagaactaggccttaacaaggcgctattaaaagccattgatgacagtggc
tatgaagaagctaccccaattcaggcagaaaccattccgttggttatgcagggattggat
gtcattggtcaggcccaaacagggactggtaaaacggctgcgtttgggttaccaatcttg
gataagattgatactgaaaatccaaacgtccaggcattgattgtgtcaccaacgcgtgag
ttggcgattcaaactcaagaagaactttaccgcttgggtaagcacgaacatgcccgtgtt
caagttgtttatggtggcgcagatattcgccgtcaaattaacagcttgaagaaccaccca
cagattgttgtggggactccaggccggttactggatcacattaaccggaaaacggttcgt
ttggatcacgttcagacgttagtgttggatgaagccgacgaaatgcttgatatgggtttt
gtggatgatattgaaagtatcatcaagcaagttccagaacaacgtcaaacattgttgttc
tcagctaccatgcctgataagatcaaacggattggggttcagttcatgaaggaacctcat
gaagtacggattaaggcaaaggaactgaccactgatttagttgatcagttctacgtgaaa
tcaaaggaatacgaaaagtttgatttgatgacacatctgtttgatgtgcaggatccggac
ttaaccattgtctttggtcgcacgaagcgtcgagttgacgaattgtctaagggattagaa
gcccgtggctacaatgccgctgggattcatggtgatttgacacaacagcgtcgttcacaa
attcttaaacaattccgtgatggtaagctagacattctggttgcaactgatgttgcggcc
cgtggtctggatatctccggtgtgactcacgtttataactatgatattccacaagatcca
gaaagctatgttcaccggattggccgtactggtcgtgccggtcaccatggaacaagtttg
acgtttgttacgccaaacgaaatggattacttacgtgagattgaaaaactcaccaaggtg
cggatgctgcccctcaagccaccgtcagttgccgaggcttttgctggtcaattatcagct
gccgaaaacaaggttgcggacctggttaaagagacagatacatccaagttcgataaagag
gctaccgaattactggatcgttatgatgcagaagaattggttgctgctttattgagtaac
ttgacgcctggtgatgaacacgatacgccagttcacattacaccagaacgcccattgcct
agtcgtcatggtggcggccggggcaatggccgtggtggccgtggtcacggtggttatcgt
ggtaataaccgtaatggtcgtaacaaccggaactcacgtgaacgtgaaaatggtaaccgt
ggtcgttttgatcacaagtcaggttcccgtaacaacagctcacgtagtaacagttcccgg
aatggcgggagcagcaatcatggcggcaacaaacatggttactcaatcaaccataaataa
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