Furfurilactobacillus rossiae: LROSL1_0788
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Entry
LROSL1_0788 CDS
T06823
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lros
Furfurilactobacillus rossiae
Pathway
lros03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lros00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LROSL1_0788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lros03021
]
LROSL1_0788
03400 DNA repair and recombination proteins [BR:
lros03400
]
LROSL1_0788
Enzymes [BR:
lros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LROSL1_0788
Transcription machinery [BR:
lros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LROSL1_0788
DNA repair and recombination proteins [BR:
lros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LROSL1_0788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QLE63607
LinkDB
All DBs
Position
899165..902821
Genome browser
AA seq
1218 aa
AA seq
DB search
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPERDGLFDERIFGPTKDWEC
ACGKYKRIRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVLESGNTPLERKQLLSEREYREKKAQYGNEFQAEMGAEAIRKLLA
AVDLDKEASELKEELKDASGQKRTRAVRRLDILEAFIQSGNRPDWMVMDVVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPTLKMNQMGLPVP
MAMELFKPFIMKELVKRDLASNIKNARRKIDRQDNDVYDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRVHPLVCEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAGHIL
APANGRPVVTPSQDMVIGNYYLTTEEAGREGEGMIFKDLNEARVAYQNGYVHLHSRVGVQ
TSSMPTKPFTDEQKSRILITTVGKMIFNAILPDEFPYLNEPTSDNLTDGIDDRFFLEPGT
DLKSVLSNQPLNDPFKKGFLADIIAEVYKRYKVTATSLLLDRMKDLGYYESTNSGLTVGI
ADISTLKTKNDVVADARKQVATISKQFRRGLITDDERYQRVIDVWNTAKDDIQEQLVDSM
EWNNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGQTMELPIVSNFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREKDCGTDRGLTIHAITNGNEMIESLY
ERILGRYAMKSVKHPKTGETLVKANQMIDEDVAQSIVDAGVTEVVIRSAFTCNTKHGVCE
RCYGRNMATGDRVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGDDITQGLPRVQEIV
EARNPKGKAEITEVTGTIVSIEENPAERTKEVTVKGEAETRSYTLPLRARMRVAEGDFIH
RGSALNEGSIDPKELLKVRDVLSTENYLLREVQRVYRMQGVGIADKHIEIMVRQMMRKVR
VMDPGDTDMLPGTLMDIADFKDANTKTLVAGGIPATSRPVILGITKAALETNSFLSAASF
QETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMPDYRKIQPKEAEVTGTEGVYSI
SDLEKKMREEDAKNTSTK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtcaacaaatttgaaagcatgcagattgggcttgcgtcgcccgacaaaatc
cgcagctggtcatatggtgaagttaagaagcctgagaccatcaattatcggacattaaag
cctgaacgtgatggcttgttcgatgaacggatttttggcccaacaaaagactgggaatgt
gcgtgtggtaagtacaaacggattcgctataagggtgttgtttgtgaccgttgtggtgtt
gaagttacacgttctaaggttcgtcgtgaacggatggggcatattgaattagctgctcct
gttacccacatttggtacttcaagggtattcctagtcgtatggggttggttcttgacatg
agcccacgggcacttgaagaaatcatctactttgcttcatacgttgtgttggaatcaggc
aacacacctttggaacgcaagcagttgttatctgaacgtgaataccgtgaaaagaaagcc
caatatggtaacgaattccaagctgaaatgggtgccgaagcaattcgtaaattgctggca
gctgttgacttggataaagaagccagcgaattgaaggaagaattaaaggatgcatctggt
caaaaacggactcgtgccgttcgtcgtctagatatcttggaagcctttattcaatccggt
aaccgtcctgactggatggttatggacgttgttccggttattccaccggacttacggcca
atggttcaattggaaggtggtcgttttgccacttctgacttgaacgacttataccgtcgt
gttatcaaccgtaacaaccgtttgaagcggttgttagacttgaatgcacctggtatcatc
gtgcaaaacgaaaagcggatgttgcaggaagctgttgacgcgttaattgataacggtcgt
cgtggccgtcctgtcgccggtcctggtaaccgtccgttgaagtcactatctcatatgttg
aagggtaagcaaggacggttccgtcaaaacttacttggtaaacgtgttgactactctggc
cgttctgttattgatgttggcccaactttgaagatgaaccaaatggggttacctgtgcca
atggccatggaactcttcaagccattcatcatgaaagagttggttaagcgtgatcttgct
tctaacatcaagaatgctcgtcgtaagatcgaccgtcaggataacgatgtttacgatgtt
cttgaagatgttatcaaggaacacccagttctgttgaaccgggcccctaccttgcaccgt
cttgggattcaggcatttgaaccagtgcttgtttctggtaaagcgatgcgtgtgcaccca
cttgtgtgtgaagcctacaacgccgacttcgatggtgaccaaatggccattcacgttccg
ttatcagacgaagcgcaagctgaagcacgtttgctgatgctggctgccggacacatcttg
gcacctgccaatggtcgtccagtggttacaccttctcaggatatggttatcggtaactac
tacctgactactgaggaagctggtcgtgaaggcgaaggcatgatctttaaagatctgaac
gaagctcgcgtggcctaccaaaacggttatgttcacttacacagccgtgttggtgtgcaa
acttcatcaatgccaactaaaccatttactgatgaacaaaagagccgtatcttgattacg
actgttgggaagatgatttttaatgccatcttgcctgacgaattcccatacttgaacgaa
ccaacgagtgacaacttgacagacggtatcgatgaccggttcttcttggaacctggtact
gacttgaagtcagtattgagtaatcaaccgctgaatgatccattcaagaaaggcttcttg
gctgatatcattgctgaagtctacaagcgttacaaggtaacagctacttcattgctattg
gaccggatgaaggatttgggttactacgaatctactaactctggtttgacggttggaatc
gctgatatttcaacgttgaagacgaagaatgatgtcgttgctgatgcacgtaagcaagtt
gctacgatttctaagcagttccgtcgtggtttaattactgatgacgagcgttaccaacgt
gttattgacgtttggaacactgctaaggatgacattcaagaacaattggttgactccatg
gagtggaataacccaatctttatgatgagtgattccggtgctcgtggtaacatttcaaac
tttactcaactagctggtatgcgtggtttgatggctgcgcctaacggtcaaacaatggaa
ttgccaatcgtttcaaacttccgtgaaggtctctctgtgttggaaatgtttatttccact
catggtgcccgtaaaggtatgactgatacggctttgaagactgccaactctggttacttg
actcgtcgtctggttgatgttgcgcaagacgttatcattcgtgaaaaggactgtggtact
gaccgtggtttgacgattcatgccattactaacggtaatgaaatgatcgaatccttgtac
gaacggattcttggtcgttatgcaatgaagtcagttaaacatcctaagactggtgaaacc
ttagttaaggctaaccagatgatcgatgaagacgttgctcaatccatcgttgatgctggc
gtaacagaagttgtgattcgttcagccttcacttgcaacacgaaacatggtgtttgtgaa
cgttgttacggtcgtaacatggccactggtgaccgggttgaagttggtgaagcagttggt
actgttgctgcccaatcaatcggtgaacctggtactcaattgaccatgcgtaacttccat
actggtggtgttgccggtgacgatattacccaagggcttcctcgtgttcaggaaattgtt
gaagctcggaaccctaaaggtaaagctgagattactgaagtgactgggacaatcgtctca
atcgaagaaaacccagctgaacggacgaaagaagttacggttaaaggtgaagccgaaaca
cgttcatacacgttgccattacgggcgcggatgcgtgttgctgaaggtgactttatccac
cgtggttccgcattgaacgaagggtcaattgatcctaaggaattgctgaaagttcgtgac
gttctgtcaaccgaaaactacctgttacgtgaagttcaacgtgtttaccggatgcaaggt
gttggtattgccgacaagcatattgaaatcatggttcgtcagatgatgcggaaagttcgt
gtcatggatccaggtgacactgatatgttgccaggaacattgatggacattgctgacttt
aaggatgctaacacgaagacgttagttgctggtggtattcctgcaactagtcgtccagtg
atcttaggtattactaaggctgctttggaaacaaacagtttcttgtctgctgcttcgttc
caggaaacaacgcgggttcttaccgacgctgctatccgtgggaagaacgacccacttgtt
gggttgaaggaaaacgttattatcgggaagatcattccagctggtactgggatgccagat
taccggaagattcagccaaaagaggctgaagtaactggtaccgagggcgtttattccatt
agtgacttagaaaagaaaatgcgtgaagaggatgctaagaacacaagtaccaagtaa
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