Furfurilactobacillus rossiae: LROSL1_1395
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Entry
LROSL1_1395 CDS
T06823
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lros
Furfurilactobacillus rossiae
Pathway
lros03030
DNA replication
lros03430
Mismatch repair
lros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LROSL1_1395
03430 Mismatch repair
LROSL1_1395
03440 Homologous recombination
LROSL1_1395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lros03032
]
LROSL1_1395
03400 DNA repair and recombination proteins [BR:
lros03400
]
LROSL1_1395
Enzymes [BR:
lros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LROSL1_1395
DNA replication proteins [BR:
lros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LROSL1_1395
DNA repair and recombination proteins [BR:
lros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LROSL1_1395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
T2SSK
DNA_pol_A_exo1
DUF655
RepB-RCR_reg
Motif
Other DBs
NCBI-ProteinID:
QLE64212
LinkDB
All DBs
Position
complement(1532619..1536938)
Genome browser
AA seq
1439 aa
AA seq
DB search
MALNQHELFIKLLDQLNLESQATDANFVNAQITDMVVHEQSRTWSFGFHFDHILPFETFM
NFSQRLTQAFDEIATVNFHIASNDTHAEIETIARYWTWAVSHSGLNEQFARQLCEGTAPT
MDGERVIITAPNQVVSDFLSGDTLTALVATYQRLGFPELSFATTVDEAASAQQLADFQAA
KEKRDEEMVTKAAAVIAKNKAEHSSAPTVNGPVSMGRKIKDDEPVRRMDEITEEERSVTV
EGYVFAKEIRVLRSGRQLLTIKITDYTSSFIVKKFSRNEDDEANFAAIPEKAWVKVRGSV
QEDNFSRDLAIIANDLQVFSHTEREDTAPEDGKRVELHLHTQMSTMDATNNIADFVSRAA
KWGHKAIAITDHAGVQGFPAAFKAAEKAGIKMLYGVEVNLVDDGEPIGINDAHEVLKGHE
YVVFDVETTGLSAIYDKVIELSAVKMQDGNVIDQFEEFIDPGFHLSDTTTNLTSITDDMV
AGSKTEEEVFKMFRDWYGDDILVGHNVTFDVGFMNTGYVRHDMPEIDNPIIDTLTLARFL
YPTLKGYRLNTLAKKFNVSLEHHHRAIFDAESTGHLAMIFLKDAEERYGIVYHDQLNEHM
SDNDAYKHARPFHATVIAKTQAGLKNLFELVSLSNVKYFYRVPRVPRSELNRLREGLIVG
SACSSGEVFEAAMQKGKAEALKRAKYYDYLEVQPKPVYKPLIEGELIHDNAKLEAIIKSL
VEIAHELDKPIAATGDVHYLDPHDAIYRKILISSQGGANPLNRHSLPDVHFRSTDEMLSE
FSFLGDDLAQELVVTNPNKIVDMVEDVHPLKDKLYTPRMAGAEDEIRERTMDTAHELYGD
PLPDIVQKRVDRELKSIIGNGFSVIYLIAQRLVHKSNKDGYLVGSRGSVGSSVVATFAGI
TEVNPLAPHYLCPNPECKYSEFFTHGEYSSGYDLPDKNCPKCGTLLKKNGQNIPFETFLG
FKGNKVPDIDLNFSGDYQPIAHNYTKVMFGEDNVYRAGTIGTVADKTAYGYVKAYERDHD
VTFRQAEIDRLSSGATGVKRTTGQHPAGIIIVPDYMDIYDFTPIQYPADDQDAAWQTTHF
DFHSIHDNILKMDILGHDDPTMIRTLQDLSGIDPKTIPTDDPGVMGLFSGTDVLGVTEEQ
IFSKTGTLGIPEFGTRFVRGMLEETHPKNYSELLQISGLSHGTDVWLGNAEELIKDGTAT
IANVIGCRDNIMTDLINYGLDSEMSFQIMESVRHGRGIPDEWQAAMRESNVPQWYIDSCL
KIKYMFPRAHASAYILMALRVAYFKVYFPMLYYAAYFSVRADDFDLVAMSRGKNAVKASM
KTIMDKGNDASTKEKSLLTVLELANEMMERGFKFKMIDVERSDAQSWLIDGDSLIAPFNA
VPGLGDNVAKQIVAAREEKPFLSKEDLSKRGKVSATIIDFLTENHVLDDLPDENQLSLF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttaaatcaacacgagctttttattaaattactagaccaactaaatcttgagtca
caggcaaccgacgcaaattttgtgaacgcgcagattaccgatatggtcgttcatgaacag
agcaggacctggagttttggctttcattttgatcacatcttgccgttcgaaacgtttatg
aacttttcacagcgattaacccaagcgtttgatgagatcgcaacggtaaactttcacatt
gcttcaaatgatacacatgctgaaattgaaacgattgcgcgctactggacctgggcagtc
agtcacagcggattgaacgagcagtttgcacgacagttgtgtgaaggaacagcaccaact
atggatggcgaacgagtgattattacggcgcccaatcaagttgtttcagattttcttagc
ggtgacacattgaccgctttagttgccacgtatcagcgattaggtttccccgaattgtca
tttgcaacgacggttgatgaagcggcatcagcgcaacagcttgctgattttcaggcagcc
aaggaaaaacgagacgaagaaatggtcaccaaagctgctgccgtcatcgccaaaaataag
gccgaacattcatctgcgccaaccgtcaacggtcctgttagtatggggcggaaaattaaa
gatgacgaaccagttcgtcgaatggatgaaattactgaggaagaacgcagtgtgaccgtt
gagggttacgtgttcgccaaagaaattagagtacttcggtcaggccgacagttgctgacg
ataaaaattacggattacacctcttcattcatcgtgaagaaattttcacggaatgaagat
gacgaagctaattttgcggccattcctgaaaaagcgtgggttaaagttcgtggctctgtg
caggaagataacttctcgcgggacttagccattattgccaatgatttgcaggtgttttct
catacagaacgagaagacactgcgccagaagatggtaagcgggtggaattgcacctccat
actcagatgagcacgatggatgctacgaataacattgctgattttgtcagccgggcagca
aaatggggtcacaaggcgattgcaatcacagaccatgctggtgtccaaggtttcccagca
gcgtttaaagctgctgaaaaggctggcattaaaatgctgtatggtgttgaggtcaacttg
gtcgacgatggtgagccaattgggatcaatgacgctcatgaggtgctaaaaggtcacgaa
tacgtggtgtttgacgttgaaacgactggtctttcagccatttacgataaagttatcgag
ctttctgccgttaaaatgcaggatggtaacgtcattgatcagttcgaggaatttattgac
cctggttttcacttgtctgatacgaccactaacttaacgagtattacggatgatatggtg
gcagggtctaagactgaagaagaagtctttaaaatgttccgtgattggtatggcgacgat
attttggtcggtcataacgtgacatttgatgtcggttttatgaacactggttatgtgcgt
catgatatgccagaaatcgataatccgattattgatactttaacgctggcacggttttta
tacccgacgttaaagggttaccgtctgaatacactagccaaaaaattcaatgtttcattg
gaacatcatcaccgtgccatctttgatgctgagtcaacgggtcatttagccatgattttc
ttgaaagatgcagaagaacgctatggcattgtttatcatgatcagttgaatgaacacatg
agtgacaacgatgcgtacaaacatgcgcgaccatttcacgcaaccgtgattgctaagacg
caggccggtctgaaaaacttatttgaacttgtctcactgtcgaatgtgaaatacttctac
cgggtaccccgtgtaccgcggagtgaactaaaccgtttacgcgagggacttatcgtcggc
tcagcgtgttcctctggtgaagtattcgaagcggccatgcaaaagggaaaagcagaagca
ctcaagcgagcaaaatattacgattatttggaagttcaacctaaaccggtttacaaaccc
ttaattgagggtgagttaattcacgacaatgcaaaacttgaggcaatcattaaatcctta
gttgaaatcgctcatgaattggataaaccgattgcggcgacaggggatgttcattacttg
gatccccacgatgctatttatcgaaaaatccttattagttcgcagggtggtgctaatccg
cttaatcgtcattcattaccggatgttcatttccgttccactgatgaaatgctgtcagaa
ttcagtttcttaggggacgatttggctcaggaattggttgttaccaatccgaataaaatt
gttgacatggtcgaagatgtgcacccgctgaaagataaactgtacacgccaagaatggca
ggtgctgaggatgaaatccgtgaacggacaatggacacggctcatgaactatacggtgat
ccattgccagatatcgtgcaaaagcgtgttgaccgtgaattgaaatcgattattggaaac
gggttctctgttatttatttgattgcacaacggttagtgcataaatctaacaaggatggg
tacttggttggttctcgtgggtcggtgggctcttccgttgtagcgacgtttgccggcatt
acggaagtgaatccactggcgccccattatctttgtcctaacccagaatgtaagtacagc
gagttctttacgcatggtgaatacagttcgggctatgatttaccggataagaactgtcct
aagtgtggcacgttgcttaagaaaaacggacagaacattccgtttgaaacattccttgga
tttaaaggaaacaaggttcctgatattgatttgaacttctccggagattatcagcccatt
gcgcataactatactaaagtcatgttcggtgaggataatgtatatcgcgcggggacgatt
ggaacggttgccgataagaccgcttatggttacgttaaggcttatgaacgtgatcacgac
gttactttccgccaggctgaaattgaccgtttgtccagcggcgccacgggtgtcaaacga
acgacgggtcaacatccagccggaattatcatcgttccggactacatggatatttacgat
ttcacgccaatccagtatcctgccgatgaccaagacgctgcttggcagacaactcacttc
gatttccattcaattcatgacaatattttgaaaatggatattcttggacatgatgatcca
acgatgatccggacattacaggatttatcaggaatcgatccaaagacgattcctacggat
gatcccggtgtgatgggattgttctctggtacagatgtgctaggtgttacagaagaacaa
atcttcagtaagacagggacactgggaattcctgaattcggaacccggtttgttcgagga
atgcttgaggaaacacatccgaagaactattccgaattattacaaatttcagggctgtca
cacggaaccgacgtttggttgggtaatgcggaagagttgattaaagacggcacggcgacg
attgccaacgtgattggttgtcgtgataacatcatgaccgacttgattaactacgggttg
gattccgaaatgtcgtttcagatcatggaatctgtgcgtcacggtcgcgggattcctgat
gaatggcaagcagctatgcgcgaatcgaatgtgccacagtggtacattgattcctgtcta
aagatcaagtacatgttcccaagagcacatgcctctgcctatattttgatggcgttacga
gtggcttactttaaggtttacttcccaatgttgtattacgctgcttacttctctgttcgt
gctgatgattttgatctagttgccatgtcgcgtggtaaaaatgcggttaaggcatcaatg
aaaacgatcatggacaagggaaacgatgcatcaactaaggaaaagagtctgttaacggtg
cttgaactagctaacgaaatgatggagcgtggctttaagttcaaaatgattgatgttgaa
cgttcggatgcacagagttggttgattgacggagactcattgattgctccgtttaatgct
gttcccggcttgggcgataacgttgctaaacagattgttgcagctcgtgaggaaaagccg
ttcctgtccaaagaagatctaagcaaacggggcaaagtttctgctacgattattgatttt
ctgactgagaaccatgtgttagatgatttacctgacgaaaatcagttgagcctattttaa
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integrated database retrieval system
