Leucobacter rhizosphaerae: MUN76_01155
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Entry
MUN76_01155 CDS
T09062
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
lrp
Leucobacter rhizosphaerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
AAA_19
AAA_22
UvrD_C
DEAD
ResIII
Flavi_DEAD
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UOQ60628
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All DBs
Position
237885..241208
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AA seq
1107 aa
AA seq
DB search
MFEFDPSQQRVLALDPGRHARVVGAPGSGKTRVLVEAVARTLDRPGWAEEDVLVLAPNRT
VSAQLRAAIERRLGRARGGTPVRTAASLGFALLSRVTAVEGANAPRLLTGTVQDEAIAAV
VAEIGRGGAAASGGLVPEVMASGTYRAELRELWRVADDFGLDPARLAEELGEVRAQAVSQ
AHTRAPAPELLDRWQQSLSVIAAVSAGLARERPDECSSSALLRRAAAAVERMGATGAARA
GSVTDDGAALRLPRLILVDDAQELGEGELALLAACTRAGSRVWVFGDPDLATGAFHGERT
RALTRLHDELERRGGVAGAPDLAGASGIAEGEQVVALDRVHRHDGVLRTFIRSLTARIGA
GDGAAHRAADASSAADAAASRGLPSEHAPVQFAVAASPAEHIGILAHRFRARRLGVGGAV
PLAWSEMAVVCRTRAEANRVARLLASHQVPTRIAAGGLVLREHQIVRELIRLLQHALGLQ
PLVPGEVLSLAGGVIGGLDPVAIRRLRSALLLQARRDAHGDGGDAHGGGRGVASIDEIVA
EAFALPGDTPVVDSAGGRVLRRLGIIAAEGRATHTAGGTAREVLWALWDATRLADGWQTD
ALEGRGARSDEAHRSLDAVLGLFFALQRHEEQDSDQPIAALLEDLLQSAVPEDTLAQRSE
REVVTVTTPQGVIGREFELVAVIGAQDGSWPNLRARGSLLGAAALERWLRGGEALAPSRR
DTIHDELRLFVHSCARARSELLVVAVGDEDHHPSAFFRFGEEYACAGLPSARLTLRGAAA
QMRRRITGDTADAAAMRSLVALADAGIPGAHPDEWYGVLPASTDAPLVDLDGDPDARVSV
SPSQLERAEACPLDWVIASLGGGSGSVQASLGTLVHHALETATEPDAAAMLAAIDAEWAK
LPFDAEWESERAHRLAEAMASGLAEYLRDFESSDRRLLGQEAEFRIPIGQAVLRGMADRL
EQRLASDGTPEVTVVDLKTGRTPPTSAETAAHAQLQAYQLGVVTGAFAEATPTTEQAGTD
SGALDAARSGGARLLYVHPDATRGGGYVERGQEPISEETRAELEQRVQRIARVMSASDFT
ARVEHHCSDPHTPGNCRVHIIPAVSRA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagttcgacccctcccagcagcgcgttctcgcgctggatcccgggcgccacgcc
cgtgtggtgggggctcccgggagcggcaagacgcgcgtgctcgtcgaggccgtcgcccgc
acactcgaccggcccggctgggcggaggaggacgtgctcgtgcttgcgcccaaccgcacg
gtgtcggcgcagttgcgcgcggcgatcgagcgtcgtctcggtcgtgcgaggggcggcact
ccggtgcgcaccgcggcctcgctcggcttcgcgctgctgtcgcgggtgaccgcggtggag
ggtgcaaacgccccgcgcctgctgacgggcacggtgcaggacgaggcgatcgccgcggtc
gtcgccgagatcggtcgcggcggcgccgctgcgagcggtgggctcgtccccgaggtcatg
gcgagtggaacctaccgggccgaactgcgggagctctggcgcgtggccgacgacttcggt
ctcgaccccgctcggctggccgaggagctcggcgaggtgcgggcgcaggcggtgtcgcag
gcgcacacccgcgcgccggcgccggagctgctggatcgctggcagcagagtctctcggtc
atcgcggccgtctcggccggtctcgcgcgcgagcggcccgacgagtgcagctcgagcgcc
ctgctccgccgcgctgccgccgcggtggaacggatgggtgcgacgggggcggcccgggcc
ggcagcgtcactgacgacggagcggcactccgtctcccgaggctcatcctggtcgacgac
gcgcaggaactcggggagggcgagcttgccctgctcgccgcgtgcacgcgtgcgggctcc
cgcgtgtgggtcttcggcgaccccgacctcgcgacgggcgcgttccacggcgagcggacc
cgcgcgctcacgcgcctgcacgacgagctggaacgccgtggtggtgtcgcgggcgccccg
gatctcgcgggcgcctcgggcatcgccgagggggagcaggtcgtagcgctggatcgcgtg
caccggcacgacggggtgctgcgcaccttcattcgcagtctcacggcccgcatcggtgcg
ggcgacggcgcagcgcaccgtgccgccgacgcgtcgtcggcggcagatgcagcggcgtcc
cgagggctcccgagcgagcacgcgccggtgcagttcgcggtggccgcatcacccgccgag
cacatcgggatcctggcccaccggttccgtgcgcgtcggctcggggtcggcggcgccgtg
ccgctcgcgtggtccgagatggccgtggtgtgccgtacccgggccgaggcgaaccgtgtc
gcccggctgctcgcctcgcatcaagtgccgacccgcatcgcggccggcggcctcgtgctg
cgcgagcatcagatcgtgcgcgagctgatccggctgctccagcacgcgctcgggctgcag
cccctcgttccgggtgaggtgctgagccttgccggcggggtgatcggcgggctcgacccc
gtcgcgatccggcgcctgcggagcgcactgctgctccaggcgcggcgcgatgcgcacggt
gacggcggcgacgcgcacggcggcggccgcggcgtggcatcgatcgacgagatcgtggcg
gaggccttcgcccttcccggcgacaccccggtcgtcgacagcgcgggcgggcgcgtcctc
cggcggctcggcatcatcgcggcggaggggcgcgccacgcacaccgcgggcgggacggcg
cgcgaggtcctgtgggcgctgtgggacgcgactcggctcgccgacggctggcagaccgac
gcgctcgaggggcgcggggcgcggtcggacgaggcgcaccgctcgctcgacgccgtgctc
gggctgttcttcgcgctccagcgccacgaggagcaggacagcgatcagccgatcgccgcc
ctcctcgaggacctgctgcagagcgccgtgccggaggacacgctggcccagcggagcgag
cgcgaggtcgtcaccgtgaccactccgcagggcgtgatcggtcgggagttcgagctcgtc
gccgtgatcggcgcgcaggacggttcgtggcccaatctccgcgcccgaggttccctgctc
ggtgccgccgcgctcgagcgctggctgcgtggcggtgaggcgctggcgccgtcgcggcgc
gacacgatccacgacgagttgcgcctgttcgtccacagctgcgctcgtgcgcgctccgag
ctgctggtcgtggccgtcggtgacgaggatcaccaccccagcgcgttcttccgcttcggc
gaggagtatgcgtgcgcgggtcttccgagcgcccgtctcacgctgcgcggcgctgcggcg
cagatgcggcgccgcatcaccggtgacaccgccgatgccgccgcgatgcgctcgctcgtc
gcgctcgccgacgccgggatcccgggcgcgcacccggacgagtggtacggggtgctcccc
gcgagcacggacgcgccgctcgtcgacctcgacggtgatcccgatgcgcgcgtgtccgtg
agcccgtcccagctcgagcgcgcggaggcctgcccgctcgactgggtgatcgcgagcctc
ggcgggggcagcggcagtgtgcaggccagcctcggcacgctcgtgcaccacgcactggag
acggccaccgagccggatgctgccgccatgctcgcagcgatcgacgccgagtgggccaag
ctgcccttcgacgccgagtgggagtcggagcgggcgcaccggctcgcggaggcgatggcc
tcgggcctcgcggagtacctccgcgacttcgagtcctccgatcgccgtctgctcggacag
gaagcggaattcaggatcccgatcggtcaggccgtgctccgcggcatggccgaccggctc
gagcagcggctcgcctccgacggcacccccgaggtgaccgtcgtggatctgaagaccggg
cgcaccccgccgacgagcgcggaaacggccgcgcacgcgcagttgcaggcgtaccagctg
ggcgtggtgaccggggcgttcgccgaagcgacgccgaccacggagcaggccggaacggac
tccggtgcgctcgacgccgcccggagcggcggagcgcggctcctgtacgtgcacccggat
gcgacgcggggcggcggctacgtggagcgcggtcaggagccgatctccgaggagacccgc
gcggagctcgaacagcgcgtgcagcgcatcgcccgggtcatgtccgccagcgacttcacc
gcgcgtgtcgagcaccactgctccgacccgcacaccccgggcaactgccgcgtccacatc
atcccggcggtgagtcgcgcatga
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