Leucobacter rhizosphaerae: MUN76_04665
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Entry
MUN76_04665 CDS
T09062
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lrp
Leucobacter rhizosphaerae
Pathway
lrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN76_04665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrp03019
]
MUN76_04665
03009 Ribosome biogenesis [BR:
lrp03009
]
MUN76_04665
Enzymes [BR:
lrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUN76_04665
Messenger RNA biogenesis [BR:
lrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN76_04665
Ribosome biogenesis [BR:
lrp03009
]
Prokaryotic type
rRNA helicases
MUN76_04665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOQ61267
LinkDB
All DBs
Position
complement(1023754..1025910)
Genome browser
AA seq
718 aa
AA seq
DB search
MTSSENAEPTEAGETAAPIESEGERTTFDDLGLSEPILRAVKGLGYETPSAIQEATIPTL
LEGRDVVGLAQTGTGKTAAFALPILSRLQPGSGSPQALVLAPTRELALQVCEAFESYAAH
LPEVHLLPVYGGQAYGQQLSALRRGVDIVVGTPGRIMDHMKRGSLDLSQIKYLVLDEADE
MLKMGFAEDVETILADTPEEKQVALFSATMPAQIRRISQQYLNDPNEIKIQGKTQTSSTI
TQRYIVVSYTQKVDALTRILEVEDFDGLIVFTRTRNDTEQVAEKLRARGYSAAAISGDVQ
QAQRERTVQALKDGKLDILVATDVAARGLDVERISHVINYDLPIDTESYVHRIGRTGRAG
RTGDAISFVTPRERRMLKSIEKATKQPLTQMPLPGVEEVNATRLSRFDDEITAALDETAR
IDRFRDIIDHYVRHHNVPEADVAAALAVVAQGNTPLLLDESDDRKFERDRAQAARFLEDN
DRGGRDDRPERAPRGERRTDLQMYRIEVGRRQKVQPGQIIGAIANEGGLTRDDFGRIQVR
DDFSLVELPANLSPSALSALEQTRISGKLIELRPDTGGSRGGKSWEPRGDRGSDRRGGGD
RGGYRGERDGGYRGDRDGGGYRGGDRGGYRGDRDARGGGRGGDRWGSNDRGSNDRGSNDR
GNSGSGQGRWNRDDRGGYQGGRDDRGGRDSRGGRDDRGDFRGDNRGGRDDRGPRKPRW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttctgagaacgccgagcccaccgaggccggcgagaccgcagctcccatcgaa
tccgagggtgagcgcaccacattcgacgacctaggcctgagtgagccgattcttcgcgcc
gtgaaggggctcggctacgagacgccctccgctattcaggaagccacgatcccgaccctg
ctcgaggggcgcgacgtcgtcggcctcgcgcagaccggcaccggcaagaccgcggcgttc
gcgctgccgatcctgtcgcgcctccagcccggctcggggtcgcctcaggccctcgtgctg
gcccccacccgcgagctcgcgctccaggtctgcgaggcgttcgagagctacgccgcgcac
ctgcccgaggtgcacctgctgccggtctacggcgggcaggcgtacgggcagcagctctcc
gcgctgcgccgcggcgtggacatcgtggtcggtacccccggtcgcatcatggaccacatg
aagcgcggctcgctcgacctcagccagatcaagtacctggtgctcgacgaggccgacgag
atgctcaagatgggcttcgccgaggacgtcgagacgatcctcgccgacaccccggaggag
aagcaggtcgccctcttctccgcgacgatgccggcgcagatccgccgcatctcgcagcag
tacctgaacgatccgaacgagatcaagatccagggcaagacccagacgagctcgacgatc
acgcagcgctacatcgtcgtgtcctacacacagaaggtggacgcgctcacccgcatcctc
gaggtcgaggacttcgacgggctcatcgtcttcacccgcacgcgcaacgacaccgagcag
gtcgcggagaagctgcgcgcacgcgggtactccgcggccgcgatcagcggcgatgtgcag
caggcgcagcgcgagcgcaccgtgcaggcgctgaaggacggcaagctcgacatcctcgtc
gccacggacgtcgccgcgcgcggcctcgacgtcgagcgcatcagccacgtcatcaactac
gacctgccgatcgacaccgagtcgtacgtgcaccgcatcggccgcaccggccgagcaggg
cgcaccggcgacgcgatcagcttcgtcaccccgcgcgagcgccgcatgctgaagtcgatc
gagaaggcgacgaagcagccgctcacgcagatgccgctccccggcgtcgaggaggtcaac
gcgacccggctctcccgcttcgacgacgagatcaccgcggcgctcgacgagaccgcgcgg
atcgatcgcttccgcgacatcatcgaccactacgtgcgccaccacaacgtgccggaggcc
gacgtcgccgccgcgctcgcggtggtggcccagggcaacacgcccctgttgctcgacgag
tcggatgaccgcaagttcgagcgcgaccgcgcgcaggccgcccggttcctcgaggacaac
gaccgcggtggacgcgatgatcgccccgagcgcgcaccccgcggagagcgtcgcaccgac
ctgcagatgtaccggatcgaggtcggtcggcgccagaaggtgcagcccgggcagatcatc
ggggcgatcgcgaacgagggcgggctcacccgcgacgacttcggtcggatccaggtgcgc
gacgatttctcgctcgtcgagctgccggcgaacctgtcgccctctgcgctctcggcgctc
gagcagacccgcatcagcggcaagctcatcgagctgcgcccggacacgggcggatcgcgc
ggcggcaagagctgggagccccgcggggatcgcggctccgaccggcgtggcggcggcgat
cgtggcgggtaccgcggcgagcgtgatggcgggtaccgcggagatcgcgatggcggcggg
taccgcggcggtgaccgcgggggctaccgcggtgatcgtgacgctcgcggcggtggccgc
ggcggcgatcgctggggctcgaacgaccgcgggtcgaatgatcgcggctccaacgaccgc
ggcaactcgggatcgggccaggggcgctggaaccgcgacgatcgtggcgggtaccagggc
gggcgcgacgatcgcggcggacgcgattcccggggcggccgcgacgaccgcggggatttc
cgcggcgacaaccgcggcggccgggacgaccgcggaccgcgcaagccgcgctggtag
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