Limosilactobacillus reuteri TD1: N134_00290
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Entry
N134_00290 CDS
T02745
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lrr
Limosilactobacillus reuteri TD1
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrr03400
]
N134_00290
Enzymes [BR:
lrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N134_00290
DNA repair and recombination proteins [BR:
lrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N134_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Prp19
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AGR63550
UniProt:
S5NM48
LinkDB
All DBs
Position
60432..64214
Genome browser
AA seq
1260 aa
AA seq
DB search
MGTLGFVLGTAAMDHQQVLIDQLVDQIKNASADESFYYLVPNHIKFETEINVLAGLRDRQ
GLSGNDRFASSRIQVLSFSRLAWYLLRDTPAFQKQHLSKIGMAMLTSQVVQERASELRLY
ASEVKQAGFIQKMTAQLEELKNANITADDLTDIISRVKSANDPAANQAWLAKMHDVEIIY
HAYEERLRDRYIGNSELYRQLVSHLQKSPEVAKMHFFIDRFAQFTANEQQVVDALITNAA
STTISLTLDRGYPDQNHPNPQELPPKNNLFYSSAMQFHRLWKFGQMHQKEVKVLQNVAFA
TTPRVDAELQQVDSYFKRYASEPIGPGEREELSCPPNLQFMTTTNRMTELNNVATQIRQL
VASGKYRYRDFLILSRHLDGYQTMIEPVFAAHDIPVFNDHERLMDNHPLVTLLTTLLELP
QRGYRTADIIQLLKTWLLVPRTGTGDLMGLSDFQAAVFVTENWCLKQAIEGKNAWTTNDP
EKIKQLWQAPGTNLTDPKYEQSRLKKLNDQLALVKDFVANHLLPVFNQFKQAQTGQELAT
ALYQFLAAMRVTDRLYAWQQYQSTRDLDLARQPQQVWTTFCQILQEYVEILGQQELRNGT
SEVLADFSELLQAGFAAAQYSQIPATLDQVVVSETGIVQSENRKVVFMIGSTDDVMPEMQ
ESDSLLTDQDKDILSAYLDEDFQYLPGTAIDQLIDEPFVHYTGFMNAKEQLIFSAPQTDS
DDKELSISPYMHDMARYFGQPVREYPLATSKAGQENAIDFVSAPLATINRLVEVSRQIRD
EQGVGIDRQPVMPVGWQTVAESLVKLAKQWQQSADAKVQTEGILLGQRLSLVAAGFHYQN
KIDSLGNKLAQALYLRTAPGDERGRVLYASISQLQDFYINQYEYFLKYGLRLQKRDELTL
SNDRIGTFFHKAMETFVTTIRENNLSFADLAHQDNQMQRDQLIDHALVTAQENQPTLLRL
INSSAQAQFQYQQLTAIVKTMLITLCRQAEYTGSQPVKTEVQFGRIGNQQSGNLGSLDYP
LKDNHHIYLRGRIDRIDNLKQGNDNFLTVVDYKSSNHLFDLTSAYYGLSLQLLTYLNGLQ
ANLTELETSNPRLAGALYLRLNNPTIKAAELKKNSLDDLKLKEHQYKGILLNDPQLLREL
DKSLDKQAFLYPLKEYRNGKIKANKEALLVTPQQLDWLQNMNKELVINAGNQILSGDLKL
NPYRLLTGSNRRTGLDYSDFLDVFQFDNMLDQQNYRDLNPNLAKEAFDNVVQDDDEEDKK
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccctgggatttgttttaggaacagcagcgatggatcatcagcaagtgttgatt
gatcaattagttgaccagataaagaatgcatctgctgatgagagcttttattatttggtg
cctaaccatattaagtttgaaactgaaattaatgtccttgctggtcttcgtgatcgtcaa
ggacttagcggaaatgacagattcgcctcttcacgcatacaggtactttcgtttagccgg
cttgcttggtaccttttacgagatactccagcatttcaaaaacaacacctttctaaaatt
gggatggcgatgctcacttcccaagttgttcaagaacgggcaagtgagctccgtttatat
gcgagtgaagtaaaacaagctggatttattcaaaagatgacagcccagcttgaagaatta
aaaaatgccaacataaccgctgacgacttaaccgatattatttcccgggtgaagtcagcg
aatgatccagcagctaatcaggcgtggctagctaaaatgcatgatgttgaaatcatatat
catgcttatgaagagcggctgcgtgaccgatatattggtaatagtgaattgtaccggcaa
ttagtgtctcaccttcaaaaatcaccagaagttgctaagatgcacttctttattgaccgt
tttgctcagtttactgcaaatgaacaacaggtagtggatgcattaattacgaatgctgca
tcgacaactatttctttaactcttgatcgtggatacccagaccagaatcatccaaatccc
caggaacttcctcctaaaaataatttattctattcctccgcgatgcaatttcaccgttta
tggaaatttggccaaatgcatcaaaaagaagtgaaggttttgcaaaatgtagcgtttgcg
acgactcctcgcgtagatgcggaattacaacaagttgattcgtattttaagcgttatgca
agcgaaccaattggccccggcgagcgggaagagctttcttgccccccaaatcttcaattt
atgacaaccaccaatcggatgactgaattgaataatgtggctacccagattcgccaatta
gttgctagcggtaaatatcgttatcgtgacttccttatccttagtcgccaccttgacggc
tatcagacaatgattgaaccggtttttgcggcacatgatattccagtttttaatgaccat
gaacgcttgatggataatcatccgctagtaacgctcctcacaacattattagaattaccg
cagcgaggctatcgaacagcagacatcatccaattgctgaagacatggttacttgttcca
cggacaggcactggtgatctgatggggctaagtgatttccaagcagcagttttcgttact
gagaattggtgccttaagcaggcaattgaaggaaaaaatgcttggacaactaatgatcca
gaaaagattaagcaattatggcaggcgccaggaacgaacctaacagatccaaaatatgaa
cagtcacgtttaaaaaaattaaatgaccagttagctcttgtaaaagattttgttgcaaat
cacttactgccagttttcaaccagtttaaacaagcacaaacaggacaagaacttgcgact
gctttataccaattcttagctgccatgagagttacagaccggttatacgcttggcagcaa
taccaaagtacccgggatttagacctcgcgcgccaaccacaacaagtctggactaccttt
tgccaaattctccaagaatatgtggaaatcttgggccaacaagaactgcggaacggaact
agtgaggttcttgcagattttagtgagttactccaggcagggtttgcggcggcccagtat
tcccagattccggcaacgttagatcaagtggtagtctctgaaacgggaattgtccaaagt
gaaaatcgaaaagtagtttttatgattggatcgactgatgatgtaatgccagagatgcaa
gaaagtgatagtttgctaacggaccaagataaggatattttgagtgcttatcttgatgaa
gatttccaataccttcctggaacggcaattgaccaactgattgatgagccatttgtccac
tatactggctttatgaacgctaaggaacagttgattttctcggcaccgcaaactgatagt
gatgataaggaactcagtatatcgccatatatgcatgatatggctcgctactttggtcaa
cctgttcgtgaatatccattagctactagcaaggccggacaagagaatgctattgatttt
gttagtgccccgcttgcaacaataaaccggttagttgaagttagccggcaaattcgtgat
gagcaaggagttggcattgatcggcaaccggtcatgcccgttggatggcaaacagttgct
gaatcgttggttaagttggctaagcaatggcaacaatcagcggatgctaaggttcaaaca
gaagggatattactaggtcagcgtctatctttagttgctgctggtttccattatcaaaac
aagattgattccctgggaaataaattggctcaggcactttatctccgaacggcacccggt
gatgagcgcggacgggtattatatgcctcgatttcgcagttgcaagatttttatattaat
cagtacgaatatttccttaagtatggcttgaggttgcaaaaacgagatgagttaacctta
tctaatgatcgtatcggcaccttcttccataaagcgatggagacttttgttacaacaatt
cgagaaaataatttgtcatttgcagaccttgcccaccaagataatcagatgcaacgtgac
cagctgattgatcatgcattagttacagctcaagagaatcagccaactttattgcgtctc
attaattcttcagcccaagctcaattccaatatcaacaattaaccgccattgttaaaaca
atgttaattacattatgccgccaagctgaatataccggctcacagccggttaaaaccgaa
gttcagtttggaagaattggtaaccagcagtcgggcaaccttggctctcttgattatccg
cttaaagataatcatcatatttatctgcggggacgaattgaccgaatcgataatcttaag
caagggaacgataatttcttgacggtcgttgactataagtcgagtaatcatctttttgat
ctcacttcagcttattatggactctctctccaacttttaacctaccttaacgggttacag
gcaaacttaactgaattggaaacgagtaatccacgactggcaggggcattatatcttcgt
ttgaataatccgacaattaaggctgccgagttaaagaaaaattccctcgatgatttgaaa
ttaaaagagcaccaatacaagggaatcctcttgaatgatccacaattattgcgggagtta
gataagagcttagataaacaagcattcttgtacccccttaaagaatataggaatggaaaa
attaaagctaataaagaagcgcttctcgttacgccgcagcaacttgattggctgcaaaac
atgaataaggaacttgtgattaatgcgggtaatcaaattttgagtggtgacttgaaactg
aatccttaccggttattaactggaagcaaccgccgcacaggacttgattatagtgacttt
ttagacgtatttcagtttgataatatgcttgaccagcaaaactaccgcgacctaaatcct
aatttagcaaaagaagcatttgataatgtagtccaagacgatgatgaggaggataagaag
taa
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