Limosilactobacillus reuteri TD1: N134_02750
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Entry
N134_02750 CDS
T02745
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lrr
Limosilactobacillus reuteri TD1
Pathway
lrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N134_02750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrr03019
]
N134_02750
Messenger RNA biogenesis [BR:
lrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N134_02750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Propep_M14
KH_2
ArsP_2
OCIA
DUF7124
Motif
Other DBs
NCBI-ProteinID:
AGR63952
UniProt:
S5NUH7
LinkDB
All DBs
Position
621507..623060
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AA seq
517 aa
AA seq
DB search
MKILMFAALAMVVGIIVGYVIRKVSYEKQVAEAHNDAKGIISKAKQEAVTAKKEAILEAK
EESHQYRERVEDELKQRRSEVQRQEDRLLQREASLDHKDSALEKRENAVGVRERKLDQEK
EQLHQSKEQAEALIEQRKQEVEKVAQMSQEDAKQLLLSEVKEQLKTERAVMIRDSEQEAE
LSAERNAKKLIVEAIQRSAADVVSETTVSVVNLPNDDMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVVLSGFDPVRREIAKIALEKLIQDGRIHPARIEEAVDKARKQMDTQLRETG
EQALFDLGIHSMHPDLIKTVGRMKYRTSYGQNVLDHSIEVAKLAGIMAAELGEDVTLAKR
AGLLHDIGKAIDHEVDGSHVELGVELTRKYKENKVVINTIASHHGDVPANSVIAVLVQAA
DAISGARPGARSESLEQYIQRLKKLESIANSYDGVDHSYAIQAGRELRVIVKPKKISDLQ
ATTLSHDIKNKIEKQLEYPGHIKVTVIREVRAVDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttaatgttcgccgcgcttgctatggttgtcggaattattgtcggctatgta
attcgcaaggtttcatatgaaaaacaagttgcagaagcacataatgatgctaaaggtatt
atttctaaagcaaaacaagaagcagtaacggcgaaaaaagaagctattttagaagcgaaa
gaagagagtcatcaataccgcgagagagtggaagatgagttaaaacagcggcggagtgag
gtccaacgacaggaagaccgattactccaacgggaggcttctttagatcataaggatagc
gctctagaaaaaagagagaatgcagttggcgttcgtgaacgtaaattagatcaagaaaaa
gagcagcttcatcaatcaaaggaacaagcagaagccttaattgaacaacgcaaacaagaa
gttgaaaaagttgctcaaatgtcacaagaagatgctaagcagttattattatctgaagta
aaagaacagttaaaaactgaacgagcagtaatgattcgtgacagtgaacaagaagcggaa
ctttctgcagaacgtaatgcaaagaaattaattgttgaagcaattcagcgtagtgctgcg
gatgttgtctcagagacgactgtttcggttgttaaccttcctaatgatgatatgaaggga
agaataattggtcgtgaaggtcgaaatattagaactttagagacgttaacaggtattgat
ttaattattgatgatacgccggaagctgtcgtattgagcggctttgatcctgtacgacgt
gagattgctaagatcgcgcttgaaaaattaattcaagatggtcgtattcatcctgcacga
attgaagaagcggttgataaggctcgtaagcagatggatactcaactacgggagactggt
gagcaagcattgtttgatctaggaattcattcaatgcatccagacctaattaagacggtc
ggaagaatgaagtaccggactagttacggtcaaaatgtcttagaccactcaatcgaagtt
gctaagttagccggaattatggctgctgaacttggggaagatgttacactagcaaaacgt
gctggcctccttcatgatattgggaaggcaattgatcatgaagttgatggttcacatgtt
gagttaggtgtagaactaacccgcaagtataaagaaaataaagtggttatcaatacgatt
gcttctcaccatggagatgtccctgctaattctgtaattgctgttcttgtacaagcagca
gatgcaatttcaggggcccgtcctggtgctcgaagcgagtcattagaacaatacattcaa
cgtttaaagaaactagaaagcatagcaaacagttatgatggtgtcgaccatagttatgca
attcaagctggtcgagaacttcgcgtgattgtcaaaccgaagaagatttctgatttgcag
gcaacaactttgtcacatgatattaagaacaaaattgaaaagcaattagaatatccagga
catattaaagtaaccgttattcgggaagttcgagcagttgattatgctaaataa
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