Limosilactobacillus reuteri TD1: N134_03355
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Entry
N134_03355 CDS
T02745
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lrr
Limosilactobacillus reuteri TD1
Pathway
lrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N134_03355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrr03400
]
N134_03355
Enzymes [BR:
lrr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N134_03355
DNA repair and recombination proteins [BR:
lrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N134_03355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
AAA
nSTAND3
DEAD
DUF815
AAA_7
AAA_25
RsgA_GTPase
Sigma54_activ_2
NPHP3_N
TsaE
HTH_IclR
AAA_29
NB-ARC
TIP49
AAA_14
AAA_16
TBPIP
AAA_28
Zeta_toxin
HHH_5
NTPase_1
AAA_18
ABC_tran
Mg_chelatase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AGR64038
UniProt:
S5NAH6
LinkDB
All DBs
Position
720629..723106
Genome browser
AA seq
825 aa
AA seq
DB search
MAEEIDLFKTPTEPSFFIGQVQSEIFTSPDSFFKVLIVSVEEANFDWHEPEITVTGSFGD
LSDDQTYRFEGKIVEHPRYGQQFQATSYHANRPTSKDGLVDFLSGKQFTGIGKKTAKKIV
DKLGTDAINKIIADPHVLDELKLRKAVKDSLVDNLRANQGMDQIIIGLNDLGFGANLSSA
IFDKYGEETLHIINENPYQLAAEIDGISFNRADQVAQKLGIATDDSRRIDAAIIQTLDDL
TMETGDTFTTTKPLLQQTIQLLAQGSGGRVSTDLIANQIVELEKNQAISYADEKIYPTAL
YNAEWQIADHLHRLLTVDQEKVPATTIEKTVTKVADQSGITYDQVQKEAIKTALSSKVML
LTGGPGTGKTTIIKGIVASYAKIHDLSLDVNEYKEKSFPVLLAAPTGRAAKRMSEATDLP
ASTIHRLLGLNGREMPTDMNARDLEGSLLIIDEMSMVDTLLFKTLIQAIPTSMHVVLVGD
KDQLPSVGPGQVFHDLLDFAELPKVELTNIHRQAADSTIIPLAHAIKEGKLPSDLTNKMP
DRSFISCHANQVPSVVQQIIDLSKKRDYSANDIQILAPMYRGQAGIDRLNELAQQAYNPP
ANGKQEVDFRGLTFRVGDKVLQLVNVPEKNIFNGDIGKITAIESGRTVGKKNESITVDFD
GNEVSYSRMEWNQLRLAYCISIHKAQGSQFKMVLLPIVQQFSRMLQRNLLYTAITRAAEK
LVLIGEPYAVVTSVKNEAVNRKTSLVDRLDKVWSRHGELKSKLDHQTDSLAKELSSPQPV
QKENEQLINNDAQQYILTADLINSETIDPLIGMENISLQSLHQAK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaatcgacctatttaagacgccaacggagccgtctttttttattggtcaa
gtacaatctgagattttcactagtccagattcgttttttaaggttttaattgtctcggtt
gaagaagcaaactttgattggcatgagccggaaattaccgtaactggaagttttggtgat
cttagtgatgatcaaacttaccgctttgagggaaaaattgttgaacatccgcgatatgga
caacaatttcaagcgacttcttaccatgccaaccgtccgacaagtaaggatggactagtt
gatttcttgtctggaaaacaatttaccggaattggaaaaaagacggccaaaaaaattgtg
gacaagttaggaacagatgcaattaataaaattattgctgacccgcatgttttagatgaa
ttaaaactccgcaaagcagttaaggattcattagttgataatttacgagcaaaccagggg
atggaccagattattatcggcttaaatgatctcggctttggcgctaaccttagtagtgca
atttttgacaagtacggagaagaaactctgcatattattaatgaaaatccttaccaactc
gctgctgagatagatggaattagctttaatcgggctgatcaggtggcacagaaattagga
atcgccacggatgattcacgtcgaattgatgccgcaattatccagacgcttgatgacttg
acaatggaaactggtgatacatttactacaaccaaacctcttctgcagcaaactatccag
ttgcttgcccaaggaagtgggggccgtgtttcgaccgatttaattgccaaccaaattgtt
gagctagagaaaaatcaagcaattagttatgcggatgaaaaaatttatccaactgccctt
tataacgcggaatggcaaattgctgatcacttacatcgtcttcttaccgttgaccaggaa
aaagtaccagcaacgactattgagaaaacagttacgaaggttgccgatcaatcagggata
acctatgaccaagttcaaaaagaggccatcaaaacagccttaagtagtaaagttatgctt
ctcacgggaggcccaggaacgggaaaaacaacaattattaaagggattgtagcaagttat
gcgaaaattcatgatctttcattggacgtaaatgaatataaagaaaagtcatttcctgtt
ttactagctgctcctacaggccgtgctgctaaacgaatgagtgaagctactgatttacca
gcaagtacaattcaccgcttgctcgggcttaatggccgggaaatgccaactgatatgaat
gcccgcgatttagaaggatcgctattgattattgatgaaatgtcgatggtcgataccctc
ttgtttaagactcttattcaagccatccctacttctatgcatgtagttttggtaggtgat
aaggatcaattgccatctgttggtcccgggcaagttttccatgatcttcttgattttgca
gaactgcccaaagttgaactgaccaatattcaccgccaggctgctgattcaacaattatc
ccattagctcatgctatcaaagagggtaagctaccatcagatctaacgaataaaatgcca
gatcgatcatttatctcatgccatgctaaccaagtgccaagtgtggttcaacaaattatt
gacctttctaaaaaacgagattattcagcaaatgatattcaaatcttggcaccaatgtac
cgcggacaggcaggaatcgaccgtttgaatgaacttgcacaacaggcgtataatcctcca
gctaatggaaaacaagaagtcgattttaggggactaacttttcgtgttggagataaggtt
ctgcaactcgttaatgttccagaaaagaacatttttaatggtgatattggaaaaatcaca
gcaattgaaagcggtaggacagtcggtaagaaaaatgaatcaattactgtcgattttgat
ggtaatgaagtgagttatagccgcatggaatggaatcaattacggttagcttattgtatt
tcgatccataaagcacagggaagtcagtttaagatggttcttttgccgattgttcagcag
tttagccggatgcttcaacgaaatcttttatatacggcgattacccgtgccgcagaaaag
ttagtcttgatcggtgagccgtatgcggttgtgactagtgtaaaaaatgaagcagttaac
cggaaaacttctttggtcgatcggcttgataaggtttggagtaggcatggtgaactaaaa
tcaaaattggatcatcaaacggattcgttagccaaagaactttctagtccgcaacctgtt
caaaaagaaaatgaacagttaataaataatgatgctcagcaatatatcctaacagctgat
ctcattaattcagagacaattgatccattaatcggaatggaaaatattagcttacaaagt
ttgcatcaagccaaataa
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