Limosilactobacillus reuteri TD1: N134_05180
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Entry
N134_05180 CDS
T02745
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lrr
Limosilactobacillus reuteri TD1
Pathway
lrr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N134_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrr03400
]
N134_05180
DNA repair and recombination proteins [BR:
lrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N134_05180
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N134_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
DnaJ_CXXCXGXG
nSTAND1
AAA_21
AAA_29
AAA_15
AAA_23
nSTAND3
RsgA_GTPase
DUF463
DUF5679
cobW
DUF4350
NRDD
Motif
Other DBs
NCBI-ProteinID:
AGR64278
UniProt:
S5NB51
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All DBs
Position
1094376..1096889
Genome browser
AA seq
837 aa
AA seq
DB search
MTETILPTQIEVKGGRVHNLKNIDINIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYL
EALSTYTRRRIKLGAQADVTSVKHIPSALALKQRPAIPSERATVGTMSEMLNVIRLIFSR
LGEPVCPNGHRLKPSLEIAEVMSKSGDEMGQLTCPTCGTKFYAYGAEDFAFNSDGACLRC
HGTGKVRELDESKLIGDENLSLADGAVASWHLPGRNFMPSVAEQAGVRIHVPYKDLTPKE
KDFVLNGPQKKFKMDFRSGTGRVFHDFNALYENAHEAVLASAKSSKSERAQKRISEFFHY
STCPVCHGTRLKPELLNQLAGGLNIAQVSDLTLGELNKWKQDVLAALPSDMKKMATSLFK
EFDDNLRPLLELGLDYLTLSRNGNTLSTGELQRIQLARTLRTQTTGVLYILDEPSIGLHP
DNITGLLNVFKELVAQGNSLVVVDHNVDIIKEADWIIEIGPGSGEKGGEILTEGTPSQIT
DNPQSKIGPYLNGTAVLKSRPIANEPASQEIVFEVKDYYNLKDVQGEIPVNRLTAITGFS
GAGKTSLILDSLVPAIYAQANGAKLPSQVSKLSSPLKEVVSVDVAPIGKTNRSTVATYTS
IMDNLRKLFAAQPLAKEKHYTPSYFSYNNKQGACPTCGGAGVVTLDIQFLPDMQQTCPTC
GGSRYNEEVQKVKWQGYSIVDLLKLDVRAAISVFKEVPKIARELQLLDEVGLGYLHLGES
TPSLSGGEAQRLKLVKHLNHNQSETLFVFDEPTIGLHPLDVKTLLAVMQQLLDRGATIIT
ITHDLNLIINADYMLDMGPRGGSNGGKIVAQGNPLALIQKPESLTNKYLAKYWSRFN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaaccatactaccaacacaaattgaagtaaaaggtggaagagtccacaacctt
aagaacattgatatcaatatcccgctacataaatttgtcgcaatttcgggattatctggt
tctgggaaaagctcattagcaatgggaattttatatgaagagggatctcgccggtactta
gaagcgctttctacttacacacgacggcggataaagttaggtgctcaagctgatgttaca
agtgttaaacatattccttcagcactagcattgaagcaacgtcccgcaattccatctgaa
cgagcaaccgttggaacaatgagtgagatgttgaacgtaattaggctgatcttttcgcga
cttggcgaaccggtttgtccaaatgggcatcggttaaaaccaagccttgaaatcgcagag
gtaatgagtaagagcggcgatgagatgggacaattaacctgtcctacttgtggcacaaag
ttttatgcctatggagcagaagattttgcattcaattctgacggagcctgcttacgatgt
catggaacaggaaaagttcgtgaactggatgaaagtaaacttattggggatgaaaatctt
agtttagctgatggggcagttgcttcatggcatttacctggacgaaactttatgccgagc
gttgctgaacaggcaggtgtccggattcatgttccatataaagatttaacccctaaagaa
aaagattttgttttaaatggtccacaaaagaagtttaagatggacttccgctcaggaaca
ggccgtgtttttcatgattttaatgccttatatgagaatgctcatgaagcggtattagca
tctgccaaaagtagtaagagcgagcgggctcaaaaacgaattagtgaatttttccattat
tcaacgtgcccagtttgccatgggacacggttaaagccagaattattaaaccaattagct
ggtggtttaaatattgcgcaagttagtgaccttacgcttggagagttgaacaagtggaag
caagatgtattagctgctcttccttcagatatgaaaaagatggcgacctcattatttaaa
gagtttgatgacaatttacgaccattactggaattaggccttgattatttaactttgtca
cgaaatgggaatactttatcgacaggtgaattacaacgtattcagcttgcaagaactctt
cgaacccaaacgactggtgtcctatatattctggatgaaccttccatcggcttacatcct
gacaatattacaggcctcttaaacgtatttaaagaattagtggcccaaggtaattcttta
gtagttgttgatcacaatgttgatattatcaaagaagcagattggattattgaaatcggc
ccaggttctggagaaaagggtggagaaattcttacggagggaacaccatcgcaaatcact
gataaccctcagtctaaaattggtccttatttaaatgggacagcagtattaaaaagtcgc
cccatagcaaacgaaccagctagtcaagagattgtctttgaagtaaaagattattacaac
cttaaagacgtccaaggagagattccagttaatcggctgactgctatcactggtttttcg
ggtgctggtaaaacaagtctgatccttgatagtttagttcccgctatctatgctcaagca
aatggggctaaattaccttcacaagttagcaaattatcaagtccgttaaaggaagtagtg
agtgttgatgtagcgccaatcggtaaaactaaccggtcaacagtcgcaacttataccagt
attatggataatctgcggaagttatttgcagcccagcccttagccaaagagaaacactat
acaccttcttacttttcttataataataaacagggagcatgtccaacgtgtggtggcgcg
ggggtcgtaactcttgatattcaattcttgccagatatgcaacagacttgtccaacatgt
gggggaagtcgatacaatgaagaagttcaaaaagttaaatggcagggatattcaattgtt
gatctcttaaaattagatgttcgggcagcgataagtgtatttaaggaagtgccgaaaatt
gctcgtgaacttcaattattagatgaagtgggcttagggtacctgcacttaggcgaaagt
acgcctagcctttctggtggtgaggcgcaacgcttaaaacttgttaaacaccttaatcat
aatcaaagcgaaacgttatttgtatttgatgaaccgactattggcttgcatccccttgat
gttaaaacccttttagcagtaatgcagcaattacttgatcggggagcgacgatcattact
attactcatgacttaaatttgattattaacgcagattatatgcttgatatgggtccgcgt
ggtggcagtaatggtggaaaaattgtggctcaggggaatccgttagcccttattcaaaaa
ccagaaagtttaaccaacaagtatttggcaaaatattggtcaagatttaattaa
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