Limosilactobacillus reuteri TD1: N134_06975
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Entry
N134_06975 CDS
T02745
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lrr
Limosilactobacillus reuteri TD1
Pathway
lrr03030
DNA replication
lrr03410
Base excision repair
lrr03420
Nucleotide excision repair
lrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N134_06975
03410 Base excision repair
N134_06975
03420 Nucleotide excision repair
N134_06975
03440 Homologous recombination
N134_06975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrr03032
]
N134_06975
03400 DNA repair and recombination proteins [BR:
lrr03400
]
N134_06975
Enzymes [BR:
lrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N134_06975
DNA replication proteins [BR:
lrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N134_06975
DNA repair and recombination proteins [BR:
lrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N134_06975
NER (nucleotide excision repair)
GGR (global genome repair) factors
N134_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGR64464
UniProt:
S5NC93
LinkDB
All DBs
Position
complement(1434062..1436728)
Genome browser
AA seq
888 aa
AA seq
DB search
MTKQLLLIDGNSIVFRAFFAMHNQMDKFTNKDGLHTAAIYGFKLMLDHVLQNFKPDAALV
AFDAGKVTFRTKMYDDYKGGRNKTPNELTEQIPYVRELIKDSGLHSYELANYEADDIIGT
LAKQADDAGYKTLIVTGDRDLTQLASENTTVAVTHKGVTDTEHYTPAHVKEKLGITPRQI
IDMKALMGDSSDNYPGVTKIGEKTAIKLVKQFGSVEELYDHIDDLKKSKMKEHLIEDEEV
ARQCKTLATILRDAPIKIGLDDLQYQGPQTDDLIKFYKEMGFKSFLKKMDIDGAGDEDEA
EIAPIDYTVLTKDNLDELGQLTGEVSFYLEMSEENYHTSPFAGFVIGNEGHWFTSRDVDL
LKEAPLKDLLQSDSVKKNVFNAKAQIVGLHRLGIPLENINFDLLLASYLLNTNDNSNDLG
QVAQEHGYDDVRTDEEVYGKGAKRAVPDDDETFFSHLATKARAIEQLRKDLFAKLDENKQ
TPLYTDIELPLTRVLAKMEIAGVHVDAQTLKDMGSKLTERLSEIESQIYQEAGEEFNINS
TKQLGHILFEKLKLPVIKKTKTGYSTAVDVLEKLADKSPIVEQILEYRQIAKLQSTYITG
LLKVIHSNDQKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLPEGRLIRKAFIPSHEGWQIF
SSDYSQVELRVLAHITGDKNLQEDFKNGEDIHASTARRIFHLAPDAEIDRNMRRRAKAVN
FGIVYGISDYGLAQRIHVSRAEAHEFIQNYFHEFPDVKKYINDTIAFAKENGYVETITHR
RRYLPDIHAKSFSKRSFAERTAMNTPIQGSAADIIKIAMIRMQDELEKRHLKAKMLLQIH
DELVFEAPKEEIPVLSELVPKVMDSAVKLDVPLKVDSKYGDTWYDLKK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaattattgttaattgacggaaatagtattgttttccgggcattttttgct
atgcataatcaaatggacaagtttacaaataaggacggcttgcatacagctgcaatttat
ggctttaagttgatgcttgaccatgtgttgcaaaactttaaaccggatgcggctttagta
gcctttgatgcaggaaaagtaacctttcggacgaaaatgtatgatgactataagggtggt
cgaaacaagacgcctaatgaattgaccgagcagatcccttatgtgcgtgaattgatcaaa
gactctgggttacatagttatgaattagctaactatgaagctgacgatattatcggtact
ttggctaagcaggcggatgatgctggctacaagacgttgatcgtaacaggagatcgggac
cttactcagttagcaagtgagaatacaaccgttgccgttacccacaagggagttactgat
acggagcactacactccggcacatgtcaaagaaaaattagggattacgccgcgccaaata
attgatatgaaggcactgatgggtgattcttccgataattatcccggtgtaactaaaatt
ggggaaaagactgcgatcaagcttgtaaaacagtttggttcagttgaagagctttatgac
catatcgatgatctcaaaaagagtaagatgaaagaacatttgattgaggatgaagaggtt
gctcgccaatgtaagacattagcgacaattcttcgggatgctccgatcaagattggctta
gatgatctgcaatatcaaggcccacaaacggatgacttgattaagttttacaaagagatg
ggttttaaatctttcttaaaaaagatggatatcgatggggccggagacgaagatgaagct
gagattgctccaattgactacacggttttaactaaggataacttagacgaactaggacaa
ctgacaggtgaagtcagtttttaccttgaaatgtcagaagaaaactaccacacgtcacca
ttcgctggttttgtgatcggcaatgaaggacactggtttacgagtcgagatgtggacctg
cttaaagaagcgcccctcaaagatttgctccagagtgatagcgttaagaagaatgtcttc
aatgccaaggcgcaaatcgttgggcttcatcgtctcggtattccgcttgaaaacatcaat
tttgatctgcttttggcatcttaccttctaaatactaatgataatagtaacgacctggga
caagtagctcaggaacacggttacgatgatgtccgaacagatgaggaagtttatggtaaa
ggtgctaagcgcgctgtgcctgatgatgacgagaccttctttagtcacctagctacgaag
gcgcgggcaattgaacagctgcgcaaggatctttttgccaaattagacgaaaataagcaa
acgccgctatataccgatattgaattaccgctaacccgggttcttgcaaaaatggaaatc
gcgggtgtccatgtagatgcacaaactttgaaagatatgggcagtaagctaactgaacgg
ctatcagaaattgaaagtcagatctatcaagaagctggcgaggaatttaacattaactcc
actaagcaactgggccatattctgttcgaaaaattgaaattgccagtgatcaaaaagacc
aagaccggttattccactgcagttgatgtgctggaaaagttagctgataagtcaccgatt
gttgagcaaattttggaatatcgtcaaattgctaagcttcaatctacctatatcactggt
ttgctgaaagttattcattcaaatgaccaaaagatccatacgcgctacttacagacatta
acgcaaactggtcgcttgtcctctgttgatcctaacctgcaaaatattccagtacggttg
ccggaaggacgcttgattaggaaggcatttattcctagtcatgaaggctggcaaatcttc
tcttcagattattcgcaagttgaattacgggttcttgcccatatcactggtgacaaaaac
cttcaggaagactttaagaatggtgaagatattcacgccagtacagctcgccggattttc
catttagccccagatgccgagattgaccgtaatatgcggcgccgggcaaaagcggttaat
ttcggaattgtttacgggattagtgattacggactggcacaacggattcatgttagccgt
gcggaagctcatgaatttattcaaaattacttccatgaattccccgatgtaaagaaatac
atcaatgacacaattgcgtttgctaaagagaatggttatgttgagacgattactcaccgc
cgtcgttacttaccagatattcatgccaaaagttttagtaagcgatcatttgcagagcgg
actgcaatgaatacgccaattcaggggagcgctgctgatatcattaagattgcgatgatc
cgaatgcaagatgagcttgagaaacgccatctaaaggcaaaaatgctcttgcagatccat
gatgaattagtctttgaggccccaaaggaagaaatcccggttctatcggaattggtgcca
aaagtaatggattcggccgttaagttagatgtgccgcttaaagtagatagtaagtatggg
gatacctggtatgaccttaaaaaatag
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