Limosilactobacillus reuteri TD1: N134_08940
Help
Entry
N134_08940 CDS
T02745
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrr
Limosilactobacillus reuteri TD1
Pathway
lrr03420
Nucleotide excision repair
lrr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N134_08940
03430 Mismatch repair
N134_08940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrr03400
]
N134_08940
Enzymes [BR:
lrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N134_08940
DNA repair and recombination proteins [BR:
lrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N134_08940
MMR (mismatch excision repair)
Other MMR factors
N134_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
AAA_30
Viral_helicase1
PhoH
SLFN-g3_helicase
DEAD
Catalase_C
AAA_16
NPHP3_N
YflT
NACHT
AAA_12
XhlA
Motif
Other DBs
NCBI-ProteinID:
AGR64736
UniProt:
S5N6L6
LinkDB
All DBs
Position
complement(1874095..1876422)
Genome browser
AA seq
775 aa
AA seq
DB search
MKGREYGMSTKTEKELEQKYLDNVIDKVKQAEQKAEGKIKTAQHDIKGINKQIDDIHLNT
TTYSGMMDTAMSFRAQQQMLDERQNSWQHAADRLATLQRLEKKPYFARIDFREKGANESE
KVYIGLASFTDKPDHFLVYDWRAPISSVYYEGKLGKVKYQTPVGEQEVDLTLKRQFQIKD
GVIVTIFDTDEQVGDQMLLDALGNHSSTKMKSIVTTIQRKQNEIIRDTKNELLFVQGAAG
SGKTAAVLQRVAWLLYRYRGNLTSSQVVLFSPNQLFNDYIDQVLPELGEHNMVQMTYFQF
ANRRVPKLHVQNLEQRFESHQDETAKNAQQLLTSLQYFKATERYANHLGHANMRFRNLMF
NGKVFLSKEKIKEIYYSFNNNYNLGNRLDGTKEALIKYLNHRVGSEMRNKWVEDEIQSLS
KEEIDNLFNNQPREFEDEDKEYKFLARQIVMRAFMPIKKTIDHNQWLNINGQFLHLLRVT
PKLVNIAEYGISAEQWKGYVDGVKEDLKKGNISANGITIYLYLYDLITGKRGQRDIRYVF
VDEVQDYDAYQLAYLKYRFPRAKFTLLGDLNQAIFTHENSRSLLKQLGTMFDPEKTKVVQ
LTKSYRSTKQITDFTKHILIDGEAIEAFEREGNKPQVIQAKDEQEGVAAVIDILNKYQND
HDAVAIIGKDLKDSEELYQKLNANNIKTTLIRTENQRLVKGPIVVPSYLAKGLEFDAVIV
WNANDQQYHGNDERQLLYTICSRAMHELSLVSIGRATSLLDQVPTDEYEKVNVDK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagggagtatggaatgtctacgaaaactgaaaaagaactagagcaaaagtac
cttgataatgtgattgataaagtaaaacaggccgaacaaaaagcagaaggaaagattaaa
acggctcaacatgatattaagggcatcaataagcaaattgatgatatccacttaaatacc
actacttattcaggcatgatggatacggccatgtctttccgtgctcaacagcagatgtta
gatgaacgtcaaaatagttggcaacatgcagcagatcggctagcaactttacaacgactt
gaaaagaaaccttactttgctcgcattgattttcgtgaaaaaggtgccaatgaatccgaa
aaggtatatatcgggcttgcatcctttaccgataagccagatcactttcttgtttatgac
tggcgagcaccgatttcgtctgtttactatgaaggaaagctcgggaaagttaagtaccag
actccggtaggtgaacaagaggttgatcttactcttaagcgccaattccaaattaaagat
ggcgtgattgtaaccatctttgataccgacgaacaagtaggcgaccagatgctccttgat
gctcttggcaatcattccagtaccaagatgaagagcattgtcacgacgatccaacggaaa
caaaatgaaattattcgtgacacgaaaaatgaattgttgtttgttcaaggggctgctggc
tcggggaagacagcggcagttcttcaacgggttgcctggcttctttaccgttaccggggt
aatttgacctcttcgcaagttgttcttttttcacctaaccaattatttaatgactatatt
gatcaagtcttgccagaattgggtgagcataacatggtccagatgacttacttccagttt
gctaatcgccgggtgccaaagcttcatgttcagaacttagaacaacggtttgaaagtcac
caagatgaaacggctaagaatgcgcaacaactattaactagcttgcaatatttcaaagca
acagagcgttatgctaaccatcttggtcatgctaatatgcgtttccgcaaccttatgttt
aatggtaaagtctttttgagcaaagagaagattaaggagatttactactcatttaacaat
aactataacctgggaaataggttggatggaacgaaagaagctcttattaaataccttaat
caccgtgttggatctgaaatgcgcaacaaatgggtagaggatgaaattcaaagcttgagt
aaagaagaaatcgacaacctatttaataaccagccacgtgaatttgaggatgaagataaa
gaatacaagttccttgcgcgtcaaatcgttatgcgggcatttatgccaataaaaaaaacc
atcgatcataatcagtggcttaacatcaatggacaatttttacaccttctccgggtaact
ccaaaacttgttaatattgctgaatacggtatttctgcagagcaatggaaaggttatgtt
gatggggtaaaagaagacctaaagaaggggaacatcagtgcaaatggaattactatttat
ctgtacctatatgatttgattactgggaagcgtggtcaacgtgatatccgttacgttttt
gttgatgaagttcaagattatgatgcttaccagttagcttaccttaaatatcgttttccc
cgtgctaaattcacattgttaggagaccttaaccaggcaattttcactcatgagaatagt
cggtcactattaaaacagttagggacgatgtttgatccagaaaagacgaaggttgtccaa
ttaactaagtcttaccgttccacgaaacaaattaccgactttactaaacatattttaatt
gatggtgaagcgattgaagcctttgaacgtgaaggtaataagccacaagttattcaagct
aaggatgagcaagaaggggtagcggcagttattgatattcttaataagtatcagaatgac
catgatgccgtcgcaattattggtaaagatctcaaagacagtgaagagttgtatcaaaag
ttaaatgccaataatatcaagaccacccttattcggacagagaatcaacggttagtaaag
ggcccaattgttgtgccgtcatatctagcaaaagggttggaatttgatgcggttattgtc
tggaatgcgaatgatcagcaataccatggtaacgatgagcgacaattgctctatacgatt
tgttcccgagcaatgcatgagttaagtttagtatcaattggcagggcaactagtttgcta
gaccaagtgccgacagatgaatatgaaaaagttaatgttgataaataa
DBGET
integrated database retrieval system
