KEGG   Limnoglobus roseus: PX52LOC_00259
Entry
PX52LOC_00259     CDS       T06556                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
lrs  Limnoglobus roseus
Pathway
lrs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lrs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PX52LOC_00259
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:lrs02022]
    PX52LOC_00259
Two-component system [BR:lrs02022]
 NtrC family
  KinB-AlgB (alginate production)
   PX52LOC_00259
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA HTH_8 Mg_chelatase AAA_22 AAA_16 Xre-like-HTH AAA_2 nSTAND3 HTH_psq AAA_30 HTH_Tnp_1 NB-ARC NACHT bpMoxR AAA_19 TsaE FleQ ABC_tran HTH_17 HTH_29 PIF1 PhoH TIP49 AAA_14 AAA_7 HTH_23 HTH_28
Other DBs
NCBI-ProteinID: QEL13404
UniProt: A0A5C1A8E3
LinkDB
Position
297790..299160
AA seq 456 aa
MKTKPDPRRLLVIDDETSLRRTFRTALESMGHTVVEVANSAQTLDALARQSFAAAFLDLR
LGKEKGLDLLPEMLKAAEGLHVIIVTAHASFDSAVQALRLGAFDYLPKPFTPDQLRITLD
RSALVRGLTKRVADLEEQVGRLVPSPELETQEPSMRQALDVAFQVAASEAIVLFRGESGT
GKTMLARAIHAKSRRADRPFVTVHCPSLSAELLESDLFGHVRGSFTGAVRDTVGKVEAAE
GGTLFLDEIGDLPAALQPKLLRLLQEKAYERVGDTETRTADVRIMAATNRDLEAEVKAGR
FREDLFYRLNVIEVTLPPLRTRRKDVPALAVGLLQFFARQTGKALTGFTPEAEAALHAYP
WPGNVRELRNAIERGTILTPGPLIGRDHLPAQLTRAVTARVEVGGPVTLDELEAEHIRRV
VEGAASLEEAAQTLGIDPSTLYRKRKRTGDPSKRES
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaaaacgaaacccgatccgcgacgactgctcgtgatcgacgacgagacaagcctgcgg
cggaccttccgcacggccctggaaagcatgggccacaccgtcgtcgaagttgcgaatagc
gcccagacgctggacgctctcgcccggcagtcgttcgccgcggcgttcctcgacttgcga
ctcggcaaggaaaagggcctcgacctgctgcccgagatgctcaaggcggccgaggggttg
cacgtcatcatcgtgacggcccacgcgagcttcgattccgccgtgcaggccctgcgactt
ggggcgttcgactacctgcccaagccgttcacgccggaccaactgcggatcaccctcgac
cgctcggccctcgtccgcggtttgacgaaacgggtggcggacttggaggagcaagttggc
cggctggtgccgtcaccggagttggagacgcaagaaccgtcgatgcggcaggcgctcgac
gtggcgtttcaggtggccgcgagtgaggcgatcgtgttgttccgcggcgagagcgggacc
ggcaagacgatgctcgcccgcgcgatccacgcgaagagtaggcgggctgaccggccgttc
gtgacggtccactgcccgagcctgtcggccgagttgttggagagcgacctgttcgggcac
gtccgcgggtcgttcaccggggccgtccgcgataccgtcggcaaggtcgaagcggccgag
ggcgggacgctgttcctggacgagatcggcgacctgccggcggcgcttcagccgaagctc
ctgcggttgcttcaagaaaaggcttacgagcgcgtcggcgacaccgagacgcgcacggcc
gacgtgcggatcatggccgccacgaaccgcgacctggaagccgaagtgaaggccgggcgg
ttccgcgaagacttgttctaccggctcaacgtcatcgaggtgacactgccgccgctccgc
acccggcggaaggacgttcccgcactcgcggtcggtctgttgcaattcttcgcccggcag
accgggaaggcgctcaccggcttcaccccggaggcggaggccgccctgcacgcctacccg
tggccgggcaacgtccgggagttgcggaacgccatcgagcgtgggacaatcctcacgccc
ggtccgctgattggacgggatcacctgccggcccaactgacccgcgccgtgacagcacgg
gtggaagtcggcggcccggtcacgctcgacgagttggaagccgagcacatccgccgggtg
gtggagggggccgcgtcactcgaagaggcggcccagaccctcggcatcgacccgagcacc
ctgtaccggaagcggaagcggacgggcgatccgtcgaagagagagtcatga

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