KEGG   Limnoglobus roseus: PX52LOC_00420
Entry
PX52LOC_00420     CDS       T06556                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lrs  Limnoglobus roseus
Pathway
lrs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PX52LOC_00420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrs03400]
    PX52LOC_00420
Enzymes [BR:lrs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PX52LOC_00420
DNA repair and recombination proteins [BR:lrs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PX52LOC_00420
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PIF1 AAA_22 AAA ABC_tran UvrD-helicase nSTAND3 DNA_pol_lambd_f NAT10_TcmA_helicase PhoH HHH SLFN-g3_helicase AAA_16 NPHP3_N TrwB_AAD_bind DEAD AAA_28 nSTAND_NTPase5 NTPase_1 T2SSE HHH_3 AAA_29 AAA_14 MeaB KTI12 Zeta_toxin AAA_5 bpMoxR RsgA_GTPase TsaE CbiA ATP_bind_1 cobW AAA_23
Other DBs
NCBI-ProteinID: QEL13562
UniProt: A0A5C1A6V1
LinkDB
Position
511331..513544
AA seq 737 aa
MPDTLSGVIERVTFHNLENGYCVLRVRAAGHRDLVTVVGHMPQAIAGEYVNASGDWVLDR
SHGQQFKSSELKGTPPHTAEGIAKYLGSGLVKGIGPKYARKIVEAFGEKTLDVIDQSPSF
LTQVKGIGPKRIQLIREGWKESGAVRGIMAFLMSHGIGTARAVRIYKAYGENAVKLVQEN
PYRLSEDIWGFGFRTADELALKLGIPRDAPQRIQAAVRHVLSEGSTSKGHVGLPEEIVRE
ETMALTQATSEQVESAVEQLRIADEIVRDSILQASGGNVVRVPIEDGQPLAETLLYLKPL
FLAELGVARQINALRSGPHPLPATETDNALAWVESRMSITLADSQRDAIWAALTKKLLVV
TGGPGTGKTTIVRAILEMFAAKQQRVLLAAPTGRAAKRLGESTGREAKTIHRLLEYDPGI
NGFRRGRENPLDVDLLVIDEVSMVDVILMNRLLSAVSPWACVVFVGDRDQLPSVGAGSVL
ADLIDSGVVAVARLTEIHRQAGSSYIVRAAHAVNHGEQPESAPRGDGDFFYIDADDPATI
TARILAMVKDRIPAKFGLDPFRDVQILSPMNKSELGVQNLNRLLQDALNPGGGKEVQRFG
TTYRVGDKVIQTRNNYQREVFNGDIGRVIGLDEIDQILTVEFDGRPVEYEFNELDELSLA
FAISIHKSQGSEYPAVIIPVHTQHFVMLQRNLLYTGITRGRKLVVLVGSRKALWLAVTKA
ETAMRFSLLKWRLQVGE
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgcccgacaccctcagtggcgtcatcgagcgcgtcacgttccacaacctggaaaacggc
tactgcgtcctccgcgtgcgggcggcggggcaccgcgacctcgtgaccgtcgtcggccac
atgccgcaggccatcgccggcgagtacgtcaacgccagcggcgactgggttctcgaccgc
tcgcacggccaacagttcaaatccagcgaactcaagggtacgccgcctcacaccgcggaa
gggatcgccaagtacctcgggtccgggcttgtgaagggcatcggcccgaagtacgcccgg
aagatcgtcgaggcgttcggcgagaaaacgctggacgtgatcgaccagtcgccgagcttt
ctcacgcaggtgaaagggatcggtccgaagcgcatccagctcatccgcgagggctggaag
gaatccggggccgtccgcggcatcatggccttcctcatgtcgcacggcatcggcaccgcc
cgcgccgtccgcatctacaaagcctacggcgagaacgcggtgaagctggttcaagagaac
ccgtaccggctcagcgaagacatctggggtttcggcttccgcaccgccgacgagttggcc
ctgaaactcggcatcccgcgcgacgccccgcagcgcattcaggcggccgtgcggcacgtt
ttgagcgaagggtccacctcgaaggggcacgtcggcctgccggaagagatcgttcgggaa
gagacgatggcgctgacgcaggcgactagcgagcaggtggagagtgccgtcgagcaactg
cggatcgcggacgagatcgtgcgcgattcgatcctgcaagccagcggcggcaacgtcgtc
cgcgtgccgattgaagacggccaaccgctcgccgagacgctgctctacctcaagccgctc
ttcctcgcggaactcggcgtcgcccggcagatcaacgccctgcgcagcggcccgcaccca
ttgccggccaccgagacggacaacgccctcgcgtgggtcgaatcgcgcatgagcattacg
ctcgccgactcgcagcgcgatgccatctgggcggccctcacgaaaaagctgctcgtcgtc
accggtggtcccgggaccggcaagacgaccatcgtgcgggcgatcctcgaaatgttcgcg
gcgaagcaacagcgggtattgctcgccgcccccacggggcgagccgcgaagcgcctcggt
gaatcgaccggccgcgaggcgaagacgatccaccgtctgctcgaatacgaccccggcatc
aacggcttccgccgcggccgcgagaacccgctcgacgtggacttgctcgtcatcgacgaa
gtgtcgatggtggacgtgatcctgatgaaccgcctgctttccgcggtgtcgccgtgggcg
tgcgtggtgttcgtcggcgaccgcgaccaactgccgagcgtcggggccggcagcgtcctc
gcggacctgatcgactccggcgtcgtggccgtcgcccgcctcaccgagattcataggcag
gccgggtcgagttacatcgtgcgggccgcccacgccgtcaaccacggcgagcaaccggag
tccgccccccgcggcgacggcgacttcttctacatcgacgccgacgacccggccacgatc
accgcccgcatcctggcgatggtgaaggaccgcatcccggcgaagttcggcctcgacccg
ttccgcgacgtgcaaatcctgtcgccgatgaacaagtccgaactcggcgtgcagaacctc
aaccgcctcttgcaagacgccctcaaccccggcggcggcaaggaagtgcaacgcttcggc
acgacgtaccgcgtcggcgacaaggtcattcagacgcgcaacaactaccagcgcgaagtc
ttcaacggcgacatcggccgcgtgatcggcctcgacgagatcgaccagattctgaccgtc
gagttcgacggccgcccggtcgagtacgagttcaacgaactcgacgaactctcgctggcc
ttcgctatcagcatccacaagtcgcaggggagcgagtacccggccgtcatcattccggtc
cacacgcaacacttcgtgatgctgcaacgcaacctgctctacaccggcatcacccgcggc
cggaaactcgtcgtgctggtgggcagtcgcaaggccctgtggctggctgtcacgaaggcc
gaaacggcgatgcggttcagcctgctgaagtggcgactgcaggttggagaataa

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