Limnoglobus roseus: PX52LOC_00783
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Entry
PX52LOC_00783 CDS
T06556
Name
(GenBank) tandem repeat protein
KO
K20276
large repetitive protein
Organism
lrs
Limnoglobus roseus
Pathway
lrs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PX52LOC_00783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
SpaA
bMG3
FG-GAP
FG-GAP_3
DUF1416
NOMO1-like_1st
Ig_DR_A0283-like
CarbopepD_reg_2
EMC7_beta-sandw
Y_Y_Y
MetallophosN
GBD_IRG7_N
NOMO1-like_2nd
GEVED
Big_6
Motif
Other DBs
NCBI-ProteinID:
QEL13923
UniProt:
A0A5C1A6P3
LinkDB
All DBs
Position
complement(961668..969491)
Genome browser
AA seq
2607 aa
AA seq
DB search
MSPESFFVRRARALMRRPLICAPRPLEARSIKLGTLALEAREVPTVSGFVFQDYNANGVF
DTTTQLTNLGGTNPGNAGQIGTISTAVDVGVAGVTVTVYNAAGAQVAQTTTAAGGAWSTN
ATTAGQQYRVEFTGLPAGYVAGPHGGANGNATTTQFVTDGAGSANLGVVRAIDYYQDNPL
IITSEYRYGTAVGNTTPAIISFPYASGSVQQLDSTQSNVQTPAEHAIAIPASVVGTTWGL
GYNRTQKEGYAAAFVKRHSGLAPVANPTGAIFNFDLPATDTPNSVTTANVWINLQGLSAT
DISTNTAIPSIDTTGGFGAYFTARAAAGYDYDRDGDNTGWNAVGKSGFGGLDVSADGSTV
YVMNLADNRLYIISVNPDGTANTSNIRAISVPTPAGVAASDVRAWAVQVQNGLVYVGLVD
SAESTPAVRANLRGYVYAFNPATNTFGASLVNDTTGNGVGFDLSYNRGLSFGGSDNYNPW
SPTYDRVLAANPAAPNPAIDAGFASQYPQPMLSGLAFDTQGNLTISIRDRNGDQTGRGTQ
SNGPVAGPSLNGDPAGRVEGVASGELLKAFVNGGAFSLEQNGANPNPPGQTGTGVGSNLG
PAGGEYYSQDDYGNGGAGGGHGGTSLGGVAQLPGYNSILNTHFDPVYLGSLRTGGVRWFS
STSGTLEKSYQIYSRDEGAISPSDPNGTFGKANGLGDLVAIQATDPPVEIGNRVWLDTDR
DGVQDPGENGISGVTIELRSQAGVLLATAVTDANGNYYFSNGIGTNTASAKYGIATLVNG
GQYQITIPNVSGTQQTPLTGLTLTTANATHTGNGTTNDANGNLRNSDFTASGTSALAVVN
LTANPVGNSNHNIDAGFVTGVSLGNLVWEDTDNDGLFDNGEVGIPNVTVNLYNGTGTLLF
TQLTNNVGNYLFTGLVPGDYIVEVVGPAGYRSSTGSGADLINGTFETTLAAGNSVVNNQD
HGKATAGSVPTGFTIRANTVTLGGVDNLVQDFGLVRSYSLGNRVWLDKNNSGTIDGGDGG
TPGVDGATVRLYRPTDFDASGNLNAGAAAFRTTATAGGGYYRFDDLLGASATNTVQGSYV
VVVDTTVGSLVGTRSSTGTNGSASGPFEPAPTAIAAPTVTDSDDSGTTITGGLVRSGVAI
LGPGANLPANEGDLVAGANPQGTLDKQANLTVDFGFYQPLAIGNFVFEDANNNGVLDTGE
QGIDGVGVSLTDGAGTVIASTTTAGGGGYLFSNLQPGQYTIIVTTPTGFTTSTGLNGSAS
GPFEPAPQTNVDNSDHGTILSLNTSGRFVTSTVTLTDIGGNPDTVVTAKDANLRQDFGFF
RPLAIGDFIFEDKNNDGLFNGTDAAVPGVLVQLLDAGGNVLGAQTTGADGLYRFNNLAAG
NYTVRITPPAGFISSTGANGKATGPYEPATGITANNADHGTTAGGFISTTVTLLPTGNPD
EGGTANLAQDFGLFRPVLLGNLVWRDANNNGSFDPLAGETGIAGVAVDLLDSTGAVLAST
TTDANGLYQFPVAPGQYRVRITPPAGLASSTGNGVGNTSPTGPFEPSTGQTADSVDHGTT
AGTFVQTELITIADPGTAGNPDSAGFANLRQDFGLYSPISLSLGNLVFEDANNNGTLDAG
EVGIGGATVILSDAGGNQIGFTTTDGAGAYRFDNLPPGTYTVQVVAPAGYRNSDGVFTAD
STDHGVIDPTTPNAASTTVTLTDPAVAPNPDESGKANLRQDFGFYQPQAIGNLVFVDTNN
NGVLDTGETGLAGVSVQLLQNGNVLANTTTDANGNYLFSNLTSGAYLVRIVTPAGYATST
GTNGSATGAFEPGISDGTDNADHGSATAGGTISTATVTLTPGATNPDGLDNLRQDFGLIQ
PLSFGNTVFVDKNLNGTLDAGEVTLPGATVRLLNPDGSVVVSATTGADGKYQFTNLVAGS
YIVELVPPTGYTLTPVTVDPTANTGNQNIGSQVGTSIRANVTLAPGGAPLIEGNTDGNNF
VNGDFGLVAPPIAQVSGYVYRDPNLDGKYVRGTSPTGDTPIGVVTITLTDANGVVVATTK
TNGDGFYQFTGLTPGTYTISETQPAGLLDGLDTPGTLGGSSPANDKLTVTLVANDDGQNY
NFGEYQPTQVAGYVWVDANKNCTFDAGEATLANVPITISGTAFAGTSFSRPLTAADVPGG
LTILTDASGHYSFPILPPGIYSVTRGALPAADAAVYFDWCEQIDDRRTPAPTATPNLFSN
VSTTPEVTRGNLNFGVAPRSPVVPPTDPSKTDFLGSSGNTGGTGGTGGTNPNDVHDTTPG
GPSSPLVQSSPTFSTSNTTRASAYTVIASGVGMAPLVRVMDYATGGEKFRITPYEASFTG
GVRVAQGDVNGDGIDDIVTTTGVGGGPRTRVFDGATGLPIMDFFAFEPNFRGGTFVAVGD
VNGDGKADIIVGAEVGGGPRITTFSGADGSVLNNFFAFDSTQRGGVRVAAGDFNGDGRAD
IVATTGMGVPTRVRVFDGTNVAATPIRDFAPYEASFTGGVNLAVGDFNGDGKPDIIVGAE
AGGGPRAQVFSGLDLSVLYNSFAYESTFTGGVRVAAQDVNGDGKADLVTVPGSGGAARVR
VINAVTGADIDSYYAFDSTFVGGAYVG
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagagtcgttcttcgttcggcgtgcccgtgccctgatgcgccgccccctgatc
tgcgccccgcggccccttgaggctcgcagtatcaaactgggcactctggcgctggaagct
cgggaggtgccgaccgtttcgggcttcgtgttccaggactataacgccaacggcgttttc
gacacgacgacccaattgacgaacctcggcggtacgaaccccgggaacgcgggccaaatc
gggacgatctccacggccgttgacgtcggcgtggccggcgtgacggtgacggtctacaac
gcggccggcgctcaggtcgcgcagaccacgacggccgctggtggggcgtggtccacgaac
gccacgacggccggtcagcaataccgcgtcgagttcaccgggctgcccgcgggttacgtc
gccgggccgcacggaggcgcgaacggcaacgccacgacgacgcagttcgtcaccgacggg
gccggcagcgccaacctcggcgtcgtccgggcgatcgactactaccaggacaatccgctc
atcatcacgtccgagtaccggtacggtacggccgtcgggaacacgaccccggccatcatc
agtttcccgtacgcatcgggttctgtgcagcagttggactcgacgcagtcgaacgtgcag
acgccggctgagcacgccattgccattcccgcatcggtggtcggtacgacctggggcctc
gggtacaaccggactcagaaagaaggctacgcggcggcgttcgtgaagcggcacagcggc
ctcgcgccggtcgccaacccgaccggggcgatcttcaatttcgacctgccggcgaccgac
acgcccaactccgtgaccacggcgaacgtgtggatcaacctccaggggctctccgcaacc
gatatcagcacgaacaccgcgattccgtccatcgacacgaccggcgggttcggggcgtac
ttcaccgcccgcgccgcggccgggtatgactacgaccgggacggcgacaacaccggctgg
aacgcggtcggcaagagcgggttcggcggcctcgacgtgagcgccgacggcagcaccgtc
tacgtgatgaacctcgcggacaaccgcctgtacatcatttcggtgaacccggacggtacg
gccaacacctcgaacatccgggcgattagcgtccccactccggcgggcgtggccgcgtcg
gacgtgcgggcttgggcggtgcaggttcagaatgggcttgtctacgtcggcctcgtggac
tcggccgaaagcaccccggcggtgcgggcaaacctccgcggctacgtgtacgccttcaac
ccggcgacgaacacgtttggcgcgtcgctggtcaacgacacgacgggtaacggcgtcggc
ttcgacctcagctacaaccgtgggttgagcttcggcggcagtgacaattacaacccctgg
tcgccgacgtacgaccgggtgctggcggccaatcccgccgcccccaaccccgcgatcgac
gccggcttcgcctcgcagtacccccagccgatgttgtcggggctggccttcgacacgcag
ggcaatctgaccatcagcatccgcgaccggaacggcgatcagaccggccgggggacgcag
tccaacgggccggtggccggcccgtcgctcaacggcgaccccgccggtcgggtggaaggc
gtggcgtccggcgaactcctgaaggcgttcgtgaacggcggggcgttctcgcttgagcaa
aacggggccaacccgaacccgcccggtcagaccggcacgggggttggcagtaacttgggc
ccagcgggcggcgaatactacagccaggacgactacggcaacgggggggcgggcggcggc
cacgggggaaccagtctcggcggcgtcgcccaattgccgggttacaacagcattctgaac
acgcacttcgaccccgtttacctggggagcctgcggaccggcggtgtgcggtggtttagt
tccacctccgggaccttggagaagtcataccagatctacagccgggacgaaggggcgatc
agcccgtcggacccgaacggcacgttcggcaaggcgaacggcctcggcgacctcgtcgcc
attcaggccaccgatccgccggtcgaaatcggcaaccgcgtgtggctcgacaccgaccgc
gacggcgtgcaagaccctggcgagaacggcatctcgggcgtcacgatcgaactccgttcc
caggccggcgtgctcctggccacggccgtcaccgacgccaacggtaactactacttcagc
aacggcatcggcacgaacacggccagtgcgaagtacggcatcgcgacgctggtgaacggc
gggcagtatcagatcaccatccccaacgtctcgggcacccaacagacccctctgacgggc
ctgaccttgacgaccgccaacgccacccacaccggcaacggcacgaccaacgacgccaac
ggcaacctccgcaactccgacttcaccgcgtcgggcacgtcggccttggcggtggtgaac
ttgaccgccaaccctgtcggcaacagcaaccacaacatcgacgccgggttcgtcaccggg
gtgagtctcggcaacctcgtctgggaagacaccgataatgacggcctgttcgacaacggc
gaagtcggcatcccgaacgtcacggtcaacctctacaacggcacgggcacgctcctcttc
acccagctgacgaacaacgtcggcaactacctcttcacgggcctcgtgcccggcgattac
atcgttgaggtggtcggcccggcgggctaccgcagcagcaccggcagcggggccgacctg
attaacggcacgttcgaaaccaccctggccgcggggaacagcgtcgtcaacaaccaggac
cacggcaaggccacggccggcagtgtcccgaccgggttcaccatccgcgcgaacacggtc
acgctcgggggcgtggacaacctcgtccaggacttcggcctagtccgatcgtacagcctc
ggcaaccgcgtctggctggacaagaacaacagcggcacgatcgacggcggcgacggcggt
acgccgggcgtggacggggcgacggttcgcctgtaccgcccgacggacttcgacgcgagc
ggcaacctgaacgctggtgcggccgccttccgcacgacggccacggccggcggcgggtac
taccgcttcgacgacctcctcggcgcttcggccacgaacaccgtgcagggcagctacgtc
gtcgtcgtggacacgacggttggctcgctggtggggacgcggtcgagcaccggcaccaac
ggcagcgcgtctggcccgttcgagccggccccgaccgctatcgccgccccgaccgtgacc
gacagcgatgacagcggcacgacgatcactggtggcctcgtccgcagcggcgtggcgatc
ctcgggccgggagcgaacctgccggccaacgaaggcgacctcgtcgccggggcgaacccg
cagggcacgctcgacaagcaggcaaacctgaccgtggacttcggcttctaccagccgttg
gcgatcgggaacttcgtgttcgaggacgcgaacaacaacggcgtcctcgacacgggcgaa
cagggcatcgacggcgtcggcgtcagtctgaccgacggggccggcaccgtgatcgcctct
accacgacggcgggcggtggcgggtacctgttctccaacctgcaaccgggccagtacact
atcatcgtgaccacgccgaccggcttcacgacgagcacgggcttgaacggaagcgcgtcc
ggcccgttcgaaccggccccgcagacgaacgtcgacaactccgaccacggcacgattttg
tcgttgaacacgtcggggcggttcgtgacctccacggtcacgctcaccgacatcggcggc
aacccggacacggtcgtcacggccaaggacgcgaacctgcggcaggacttcggcttcttc
cgcccgctcgcgatcggcgacttcatcttcgaagacaagaacaacgacggcctgttcaac
ggtaccgacgcggccgtgccgggcgtgctggtgcaactgctcgacgcgggcggcaacgtc
ctcggcgcgcagacgaccggggcggacggcctgtaccgcttcaacaacctcgcggccggg
aattacaccgtccgcatcaccccgccggccgggttcatcagcagcaccggcgcgaacggg
aaggcgaccggcccgtacgagccggcgaccggcatcaccgccaacaacgccgaccacggc
acgacggccggcgggttcatcagcacgactgtgacgctcctgccgaccggcaacccggac
gaaggcggcacggcgaacctcgcccaagacttcggcctgttccgcccggttctgctcggc
aacctcgtctggcgggacgcgaacaacaacggcagcttcgacccgctcgccggggaaacc
ggcatcgccggcgtggccgtcgatttgctcgactccaccggggccgtactcgccagcacg
acgaccgacgccaacggcctctaccagttcccggtggcccccggccagtaccgcgtgcgg
atcaccccgccggcgggcctcgccagcagcaccggcaacggcgtcgggaacacgtccccg
accgggccgttcgaaccctcgaccggccagacggccgacagcgtggaccacggcaccacg
gccggcacgttcgtccagaccgaactcatcaccatcgccgaccccggcacggccggcaac
ccggacagcgccggcttcgcgaacctgcggcaggacttcgggctgtactcgccgatctcg
ctgtcgctcggcaacctcgtgttcgaggacgcgaacaacaacggcaccctcgacgcgggt
gaggtcggcatcggcggcgcgacggtcatcctgagcgacgcgggcggcaaccagatcggc
ttcaccacgacggacggggccggggcgtaccgcttcgacaacctgccgccgggcacgtac
acggtgcaggtggtggccccggccggctaccgcaacagcgacggcgtcttcacggccgac
agcaccgaccacggcgtcatcgacccgaccacgccgaacgccgccagcacgacggtgacg
ctcaccgacccggccgtggccccgaatccggacgaatccggcaaggccaacctgcggcag
gacttcggattctaccagccgcaggccatcgggaacctcgtgttcgtggacacgaacaac
aacggcgtcctagacacgggtgaaaccggcctcgcgggcgtgtcggtgcaactgttgcag
aacggcaacgtcctcgcgaacacgaccaccgacgcgaacggcaactacctgttctcgaac
ctcacgtccggtgcgtacctggtgcggatcgtcacgccggccggctacgcgactagcacc
ggcacgaacggaagcgcgacgggggcgttcgaaccggggattagcgacggcaccgacaac
gccgaccacggctcggcgacggccggcggcacgatctcgaccgcgacggtcaccctcacg
ccgggggccacgaacccggacggcctcgacaacctgcggcaagacttcggcctgatccaa
ccgctgtcgttcggcaacacggtgttcgtggacaagaacctgaacggcaccctcgacgcg
ggcgaagtcacgctgccgggggcgacggtccggctcttgaacccggacggctcggtcgtg
gtgtccgccacgacgggcgcggacggcaagtaccagttcacgaacctcgtggccggctcg
tacatcgtggaactcgtgccgccgaccggctacacgctgaccccggtgacggtcgacccg
acggcgaacaccggcaaccagaacattggctcgcaggtcggcacgtccatccgggcgaac
gtcacccttgcccccggtggtgccccgctgatcgagggcaacaccgacggcaacaacttc
gtgaacggcgacttcggcctcgtcgccccgccgatcgcgcaggtctccgggtacgtctac
cgcgacccgaacctcgacgggaagtacgtccggggaacgtcgccgaccggcgacacgccg
atcggcgtggtgacgatcaccctcaccgacgcgaacggcgtcgtggtggcgacgacgaag
acgaacggcgacggcttctaccagttcaccgggctaacgccgggaacgtacacgatcagc
gagacgcagccggccggcctgctcgacggcctcgacacgccgggcacgctcggcggcagt
tcgccggcgaacgacaaactcacggtgacgctcgtcgcgaacgacgacgggcagaactac
aacttcggcgagtaccagccgacccaggtggccgggtacgtctgggtggacgcgaacaag
aactgcacgttcgacgcgggcgaagcaaccctggcgaacgtgccgatcacgatcagcggc
acggccttcgcgggcacctcgttctcgcggccgctgacggccgcggacgtgccgggcggg
ctgacgatcctcaccgacgcgagcgggcactactcgttcccgatccttccgccgggcatc
tactcggtgacccgcggtgcgctgccggcggccgacgcggcggtctacttcgactggtgc
gaacagatcgacgaccgccggacgccggccccgacggcgacgccgaacctgttctcgaac
gtctcgacgacgcccgaagtgacccgcgggaacctgaacttcggggtcgccccgcggtcc
ccggtcgtgccccccaccgacccgtcgaagaccgacttcctcggctcgtcggggaacacc
ggcggcactggcggaaccggcgggaccaacccgaacgacgtgcacgacaccacccccggt
ggcccgtcgtcgccgctcgtccaatcgtctcccacgttcagcacgagcaacacgacgcgg
gcgtcggcgtacaccgtcatcgcgtcgggcgtcggcatggccccgctcgtgcgggtgatg
gactacgcgaccggcggcgagaagttccgcatcacgccgtatgaagccagcttcaccggc
ggcgtccgcgtggcccagggcgacgtgaacggcgacggcatcgacgacatcgtcaccacg
accggcgtcggcggtggccctcggacccgcgtgttcgacggggcgaccggcctgccgatc
atggacttcttcgccttcgagccgaacttccgcgggggcaccttcgtggcggtcggcgac
gtgaacggcgacggcaaggccgacatcatcgtcggggccgaggtcggcggcgggccgcgg
atcacgacgttcagcggggccgacgggtcggtgctgaacaacttcttcgccttcgactcg
acccaacgcggcggggtgcgggtggcggccggcgacttcaacggcgacggccgggccgac
atcgtggccactaccggcatgggcgtgccgacccgcgtgcgggtcttcgacgggacgaac
gtcgccgccacgccgatccgcgacttcgccccgtacgaagccagcttcaccggcggcgtg
aacctcgccgtcggcgacttcaacggcgatggcaagccggacatcatcgtcggggccgaa
gccggcggcggcccgcgggcacaggtcttcagcggcctggacctgtcggtgctgtacaat
tcgttcgcctacgagtcgaccttcaccggcggcgtccgtgtggcggcccaggacgtgaat
ggcgacggcaaggccgacctcgtcaccgtgcccggctccggcggggcggcccgcgtgcgg
gtcatcaacgcggtgacgggggccgacatcgactcgtactacgccttcgactcgaccttc
gtcggcggggcgtacgtcgggtaa
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integrated database retrieval system