Limnoglobus roseus: PX52LOC_00999
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Entry
PX52LOC_00999 CDS
T06556
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
lrs
Limnoglobus roseus
Pathway
lrs02024
Quorum sensing
lrs03060
Protein export
lrs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PX52LOC_00999 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PX52LOC_00999 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PX52LOC_00999 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lrs02044
]
PX52LOC_00999 (secD)
Secretion system [BR:
lrs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PX52LOC_00999 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
ACR_tran
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
QEL14131
UniProt:
A0A5C1A4V0
LinkDB
All DBs
Position
complement(1244778..1248107)
Genome browser
AA seq
1109 aa
AA seq
DB search
MQRNFLRGLLICLIPTVLFGAAAVFGTYRKGIDLAGGTILVYEVDLSKNVKDKKDAADGD
AEGRGLSSEDMHKLAESLKRRIDPVDTRNVIIRPVGGSRIEILVPFTPTAKKQAGTEDFV
QEVKDLVSRVGVLEFRILANDTDDKEGFEEALDTVNNQYPPEQAEKDAKFGEAPPVPRRS
DYHVSINGTDASNVKYEWIELGKEERNSLGLSNSFGGAEGGKGGLWMQLAAQRGKAVSHN
YSNERGERASYLLFSRPFTKVNPAKEEVGKEVEYFILTRVSDQDQVKVGGDINLNAFPES
QNFDWAVGFQFNGAGSAKFGQVTNRNRPTANQTVRHLAVLLDNKVMSAPQLNSQITGKGQ
ISGKFTKESVDRLVYILKSGALTAELKPNPVSENSVGATLGEDTKNKGLLAVGLSFGAVM
LFMMGYYRFAGIVACVALLINLLLTIGFMVAVNAAFTLAGLAGIVLMLGMAVDANVLIYE
RLREEREKGATLAAALRAGYDRALPTIIDTHVSSIFTAIVLFVFGNDNLKGFAVSLTVGL
IISLFTSLYVTRLIFDYWQSRRWLRELKMMRLFARPNINFMRIRHAMFAVTAILTVAGLG
LFLARGDDVLNVDFRGGTVYGGRLAEATGLSTAGGKTGLLDLLSEKRQAERLKVTDAREV
TTQGKTDTNTWEIFYAGDPKPAVVTFANKPAGKDDVIKRAEKLPDVSAEQVKVNAMGDDQ
LPSGESKSFTIRTTEKEKDLVQVMLDRLLRDDNGQPLMDLPKLEKWETTDATTKLFFSKP
ASVSYVQSLLKRVFHQKSREPLSGSSFVLSPVYSADGTPDRDREAATSKFTAMTLDVSGN
TEFAALKEAIESHKTMSRPVVMAAVGSFAPAVLNSPKAEEERAAIDGILTELKTTVESRP
VPDRLETFDAGLAKETQSRALFAIVASWIAILLYLWFRFGSWTFGLAAVFCLIHDLCFTL
GAIAICHYLHAIPALGTLFQIQDYKIDLAAVAALLTLVGYSVNDTIVVFDRIREVRGKNP
LLTEQMINDSVNQTLSRTVLASLTVFLVVGVLYWFGGDGVHLFAFVMVVGVIIGTYSSIY
VAAPLLLLFGEGKPKVEAGETTTGTLAKV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcaactttctccgcggcctgctcatctgcctcatcccgaccgtcctcttcggg
gcggcggccgtgttcggcacgtaccgcaaagggatcgacctggccggcgggaccatcctc
gtttacgaggtggacctgagcaagaacgtcaaggacaagaaggatgccgccgacggcgac
gccgagggccgggggctgtccagcgaggacatgcacaagctcgccgagtcgctgaagcgg
cggatcgacccggtcgacacccgcaacgtcatcatccgcccagtcggcgggtcgcggatc
gaaatcctcgtgccgttcaccccgacggccaagaagcaggccggcacggaagacttcgtg
caggaagtgaaagacctcgtctcccgcgtcggcgtgttggagttccgcatcctcgcgaac
gacaccgacgacaaggaaggcttcgaggaagcgctcgataccgtcaacaaccaatacccg
ccggagcaggccgagaaggacgccaagttcggcgaagcgccgccggtcccgcggcggtcc
gactaccacgtgtcgattaacggcaccgacgcctccaacgtgaagtacgagtggatcgaa
ctcggcaaggaagagcggaactcgctcggcctgagcaactcgttcggcggggccgaaggg
ggcaagggcggcctgtggatgcaactcgccgcccaacgtggcaaggcagtttcccacaac
tacagtaacgaacgcggcgagcgggcgtcgtacctgttgttcagccggccgttcacgaag
gtcaacccggcgaaggaagaagtcggcaaggaagtcgagtacttcatcctcacgcgggtt
tccgaccaggatcaagtcaaggtcggcggcgacatcaacctgaacgccttcccggagagc
cagaacttcgactgggccgtcggcttccagttcaacggcgcggggagcgccaagttcggg
caggtcacgaaccgcaaccgcccgacggccaaccagacggtccgccatctggccgtgctg
ctcgacaacaaggtgatgtccgccccgcaactgaacagccagatcaccggcaagggccag
atcagcgggaagttcacgaaggagagcgtggatcgcctcgtgtacatcctcaagtccggg
gcgctcacggccgaactgaagccgaacccggtcagcgaaaactccgtcggtgcgacgctc
ggcgaggacacgaagaacaagggtctgctcgccgtcggcctgtcgttcggggccgtgatg
ctgttcatgatgggctactaccgcttcgccgggatcgtggcctgcgttgctctgctcatc
aacctgctgctcaccatcggcttcatggtcgccgtcaacgcggccttcacgctcgccggc
ctcgcgggcatcgtgttgatgctcggcatggccgtggacgcgaacgtgctgatctacgag
cggctccgcgaagaacgcgagaagggggcgaccctcgccgccgcgcttcgtgccggctac
gaccgggcactgccgacgattatcgacacgcacgtgtcgagcatcttcaccgccatcgtg
ctgttcgtcttcggtaacgacaacctcaaggggttcgccgtcagcctgacggtcggcctc
atcatcagtctgttcacgtcgctgtacgtcacgcggctgatcttcgactactggcagtcc
cgccggtggctccgcgagttgaagatgatgcggctgttcgcccgcccgaacatcaacttc
atgcggatccgccacgcgatgttcgccgtgaccgccatcctgacggtcgccggtctcggc
ctgttcttggcccgcggcgacgacgtgctgaacgtggacttccgcggtggtaccgtctac
ggcggccgcctcgccgaagccaccggcctgagcaccgccggcggcaagaccggcctcctc
gacctgctctcggagaaacggcaggccgaaaggttgaaggtgacggacgcccgcgaggtg
acgacccagggcaagactgacacgaacacgtgggaaatcttctacgcgggcgacccgaag
ccggcggtggtgacgttcgccaacaagccggccggcaaggacgacgtgatcaagcgggcg
gagaagttgcccgacgtgtcggccgagcaggtgaaggtcaacgcgatgggcgacgaccaa
ctcccgagcggcgagtcgaagtcgttcaccatccgcacgacggagaaggaaaaggacctc
gtccaggtcatgctcgaccgcctcctccgcgacgacaacggccaaccgttgatggacctg
ccgaagttggagaagtgggaaaccacggacgcgacgaccaagctgttcttctcgaagccg
gcgtcggtgtcctacgtgcaatcgctcttgaagcgggtcttccaccagaagagccgcgag
ccactgtccgggtcgtcgttcgtgctgtcgccggtctactcggccgacggcacccccgac
cgcgaccgcgaggcggcgaccagcaagttcacggcgatgaccctcgacgtgtcggggaac
accgagtttgccgcactgaaagaagcaatcgagagccacaagacgatgagccggccggtg
gtgatggcggccgtcgggtcgttcgccccggcagtgctgaacagcccgaaggccgaggaa
gagcgggccgcgatcgacggcatcctgacggaactgaagacgacggtcgaatcccgcccg
gtgccggaccgcctggaaaccttcgacgccggcctcgccaaggagacgcagagccgggcg
ttgttcgccatcgtggcgagttggatcgcgatcctgttgtacctctggttccgcttcggc
tcgtggaccttcggcctcgcggcggtgttctgcctgatccacgacctctgcttcacgctc
ggggcgatcgcgatctgccactacctgcacgcgattccggccctgggcacgctgttccag
attcaggactacaagatcgacctcgccgccgtggccgccctgctgacgctggtcggctac
tcggtgaacgacacgatcgtggtcttcgaccgcatccgcgaagtccgcggcaagaacccg
ctgctgaccgagcagatgattaacgacagcgtgaaccaaacgctgagccgcacggtgctg
gcctcgctgaccgtcttcctggtggtcggcgtcctctactggttcggcggcgacggcgtc
cacctgttcgccttcgtgatggtggtcggcgtcatcatcggcacgtactcctcgatctac
gtcgccgccccgctgctcttgctcttcggcgaaggcaagccgaaggtcgaggcgggcgaa
acgacgacgggaacgctggcgaaggtgtaa
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