Limnoglobus roseus: PX52LOC_02125
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Entry
PX52LOC_02125 CDS
T06556
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lrs
Limnoglobus roseus
Pathway
lrs02020
Two-component system
lrs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PX52LOC_02125 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PX52LOC_02125 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrs03021
]
PX52LOC_02125 (rpoN)
Transcription machinery [BR:
lrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PX52LOC_02125 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
LacI
MarR
HTH_23
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QEL15210
UniProt:
A0A5C1A925
LinkDB
All DBs
Position
complement(2510901..2512424)
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AA seq
507 aa
AA seq
DB search
MSGMNMGMGMRQDMRQGLHLAPRMIQSMEVLQLSVMQLQEKLTNELQENPFLEVKEKHTT
TEAAPAEGDFNADAPLKHDETGDIEFARMDEINRDWGDHFNEDHRPSRSLRDELGDKKLE
AMQNVADTPQSLQEHLAEQLGYLDLTHDQTELAEFLISHLDENGYLLNHDPDRRTPIAIS
FEELASTFEVVYHRPVTVADVEEALGVIHKLEPAGVGARDTKECLLLQVDDDIEHSDLVA
AIIQHHLEDVAHNRLPAIQRRTGSDLDTIKEAIDELKRLDPRPGARFHSEGTQFVVPDAV
VSWTDEGEFDIKLTKDWTPNVRVSSKFADQLKNKEIDPKVREELIKKYRMANWLVEAIEQ
RRNTLTKVTREIMSYQRAFLEKGPDHIQPLKMEQIAEKVGVHVTTVSRAVDDKWVQTPRG
VFPLRRFFGGGTKNAQTGVDVAWETIKQKLQEIIAAEDKAKPLSDEEIVEKFKAFGLTVA
RRTVTKYREAMSIPSSRQRKDWAATAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatgaacatgggcatggggatgcggcaggatatgcggcaagggctgcaccta
gccccgcgcatgatccagtcgatggaagtcctgcaactgtcggtcatgcagcttcaggaa
aagctcaccaacgagttgcaggagaaccccttcctcgaagtgaaggaaaagcacaccacg
acggaggccgcaccggccgagggggacttcaacgccgacgccccgctgaagcacgacgag
accggcgacatcgagttcgcccgcatggacgagatcaaccgcgactggggcgaccacttc
aacgaagaccaccggccgagtcggtcgttgcgtgacgaactcggcgacaagaagctggag
gcgatgcagaacgtcgccgatacgccgcagtcgctgcaagagcacctggccgagcaactc
ggctacctcgacctgacgcacgaccagacggaactggccgagttcctcatctcgcacctc
gacgaaaacggttacctgctgaaccacgacccggaccgccgcacgccgatcgcgatttcg
ttcgaagaactcgccagcacgttcgaggtcgtctaccaccggccggtcacggtcgccgac
gtggaagaagccctgggcgtgatccacaagctcgaaccggccggcgtcggtgcccgcgac
acgaaggagtgcctactcctgcaagtggacgacgacatcgaacactccgacctggtcgcg
gcgatcatccagcaccacctcgaagacgtggcccacaaccggctgcccgcgatccaacgg
cgcaccggctcggacctggacacgatcaaggaagccatcgacgaactcaagcggctcgac
ccgcgaccgggggcccggttccactccgaggggacgcagttcgtggtgcccgacgccgtc
gtgagttggaccgacgagggcgagttcgacatcaagttgacgaaggactggacgccgaac
gtgcgggtcagttcgaagttcgccgaccagttgaagaacaaggagatcgacccgaaggtg
cgggaagaactcatcaagaagtaccgcatggccaactggctggtcgaggcgatcgagcag
cggcggaacacgctgacgaaggtgacgcgcgagatcatgtcgtaccagcgggcgtttctg
gagaaggggccggaccacattcagccgctgaagatggaacaaatcgccgagaaagtcggc
gtccacgtgacgacggtgagccgggcggtggacgacaagtgggtgcagaccccgcggggc
gtgttcccgctccgccggttcttcggcggcggcacaaagaacgcccagaccggcgtcgac
gtggcctgggagacaatcaagcagaagttgcaagagatcatcgcggccgaggacaaggcg
aagccgctgtcggacgaggaaatcgtcgagaagttcaaggccttcggcctgaccgtggcc
cgccggacggtgacaaagtaccgcgaggcgatgagcattccgtccagccgtcagcggaaa
gactgggccgcgacggcggggtga
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