Limnoglobus roseus: PX52LOC_03220
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Entry
PX52LOC_03220 CDS
T06556
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lrs
Limnoglobus roseus
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrs03032
]
PX52LOC_03220
03400 DNA repair and recombination proteins [BR:
lrs03400
]
PX52LOC_03220
Enzymes [BR:
lrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PX52LOC_03220
DNA replication proteins [BR:
lrs03032
]
Prokaryotic type
DNA Topoisomerases
PX52LOC_03220
DNA repair and recombination proteins [BR:
lrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PX52LOC_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEL16279
UniProt:
A0A5C1AA63
LinkDB
All DBs
Position
complement(3801402..3804353)
Genome browser
AA seq
983 aa
AA seq
DB search
MPTPRKKPDAEKKTPAKKAPARKTTKKADAEAAAQIPTGVEPAAARRKRTAAASTDRSVP
GATASSGGKGKYDLVIVESPAKAKTINKYLGNAYKVLASYGHVRDLATNKKGVKDEEVQG
INISDGWKLRYVVDAGSKNKVRRGRRTQREILDELQAAAGKANRVLLASDPDREGEAIAW
HIADELQLNPDNTYRITFQEITKSAIQTALANPEAINMDRVKAQEARRAMDRVVGFPLSN
LLGDKVQYGLSAGRVQSVAVRLIVERELEIEAFKSEEYWKLTALLTPEGSGVTWKAVASK
SKIFAKKKVEKPALAADAKPEDPNAPEKPDDDEEEKSGIPEAPEGAFTAELAKWNSAELA
LKSEADTDAVLKALEGQPFVITKVEQKDQQQKPRAPFTTSTMQQDANQRLRFTAKRTMDT
AQRLYEGVELTGLGPTALITYMRTDSTRISADALNTVRGHIQQAFGDRYLPAKANFYASG
KSAQEAHECVRPTDVAMTPQRAGSLGLAGDQLRLYTLIYNRFVACQMTPALFAITNVEIT
AGAGLFRTTGRILKFDGYMRVLPPGKREDTELPPLAEKQTLNRLDLFSTQHFTQPPPRFN
DGSLVRMLEKEGIGRPSTYASIIQTIQDRGYVSQKDRRFYATGLGKVITKLLKDHFPKIM
DYKFTSHFEEELDEIETRKFQYEDVLNEFWGSFTKELEAAKTAMPQHRGGIPTGEMCPKC
GRPLEERISRKTKKPFVGCSGFADEANPCKYIVGVIEPEVTDIPCPKCGKFMLKRQGKSG
FFLGCSGYPDCKTTMNFGPDGKPVLSSVETEYTCEKCGKPLAKREGSRGPFLGCTGYPKC
KNIVDIGPDGKPAKPIETGVTCDKCQSPMTIKRGPRGPFLACTAYPKCRNAKPLSAELKE
QLKDVLPPPPVKKPMPNVEITEACPECEGPMKLQKSRFGGGKFFLSCAKYPKCKGTKKVT
PELELKIQEAEAAAASAPVEATA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacaccacgcaagaagcccgacgccgagaagaaaacgcccgcgaagaaggcaccc
gcccgcaagaccaccaagaaggcggacgcggaggccgccgcgcaaatcccgaccggcgtt
gaacctgccgccgcccgccgcaagcgtacggcagccgccagcaccgaccgaagcgtgccc
ggcgcgaccgccagcagcggcggcaagggcaagtacgatctcgtcatcgtggaatcgccc
gcgaaggcgaagaccatcaataagtacctgggtaacgcctacaaagtgctcgccagctac
ggccacgtccgcgacctcgcgaccaataagaagggcgtgaaggacgaggaagtgcagggc
atcaacatctccgacggctggaaactgcggtacgtcgtggacgccggcagtaagaacaag
gtccgccgcggccgccgcacgcagcgggagattctggacgaactgcaagccgccgccggt
aaggcgaaccgcgtcctgctggcgagcgaccccgaccgcgaaggggaagcgatcgcctgg
cacatcgccgacgaactgcaactgaacccggacaacacgtaccgcatcaccttccaggaa
atcacgaagtcggcgatccagaccgcgctcgccaacccggaagcgatcaacatggatcgc
gtgaaggcccaggaagcccgccgggcgatggaccgcgtcgtcgggttcccgctgtcgaac
ctcctcggcgacaaggtgcagtacggcctcagcgccggtcgcgtgcaatccgtggccgtg
cggctgatcgtcgagcgagaactggagatcgaggcgttcaagagcgaggaatactggaag
ctcaccgcgctgctgacgcccgagggcagcggtgtgacgtggaaggccgtcgcttccaag
agcaagattttcgcgaagaagaaggtcgagaagccggccctagccgccgacgcgaagccg
gaagacccgaacgcgccggagaagccggacgacgacgaggaagaaaagtcgggtatcccg
gaagcccccgaaggggcgttcaccgccgaactcgcaaagtggaacagcgccgaactcgca
ctgaagtccgaggccgacaccgacgcggtgctgaaggccctcgaaggccagccgttcgtc
atcacgaaggtcgagcaaaaggaccagcagcagaagccgcgggcgccgttcacgaccagc
accatgcagcaggacgccaaccagcggctgcgcttcaccgcgaagcggacgatggacacg
gcccaacgcctctacgaaggggtggaactgaccgggctcgggccgaccgccctcatcacg
tacatgcggaccgacagcacgcggatttcggccgacgcgctcaacaccgtgcgcggccac
atccagcaggcgttcggcgaccgttacctgccggcgaaggcgaacttctacgccagcggc
aagtcggcccaggaagctcacgagtgcgtgcggccgaccgacgtggcgatgaccccgcag
cgagccgggtcgctcgggttggccggcgatcaactgcggctgtacacgctcatttacaac
cgcttcgtcgcctgccagatgacgccggcgctgtttgccatcacgaacgtcgagatcacc
gccggggcggggctgttccggaccaccggccgcatcctgaagttcgacgggtacatgcgg
gtgctgccgcccggcaagcgcgaggacacggaactgccgccgctcgcggagaagcaaacg
ctgaaccggcttgacctgttcagcacgcagcacttcacgcagccgccgccgcggttcaac
gacggctcgctcgtgcggatgctcgaaaaggaaggcatcggccgcccgtccacgtacgcc
agcatcatccagacgatccaggaccgcgggtacgtttcgcagaaggaccgccgcttctac
gccacgggtctcggcaaggtcatcacgaagctgctgaaagaccacttcccgaagatcatg
gactacaagttcacgagccacttcgaggaggaactcgacgagattgagacgcggaagttc
cagtacgaggacgtgctgaacgagttctggggcagtttcacgaaggaactcgaagccgcg
aagacggcgatgccccaacaccgcggcggcatcccgacgggcgagatgtgcccgaagtgc
ggccgaccgctcgaagagcgcatcagccgcaagacgaagaagccgttcgtcggctgtagc
ggcttcgcggacgaggcgaacccgtgcaagtacatcgtcggcgtgatcgagccggaagtc
acggacatcccgtgcccgaagtgcggcaagttcatgctgaagcgccagggcaagagcggc
ttcttcctcggctgctccggctaccccgactgcaagacgacgatgaacttcggccccgac
ggcaagccggtgctgtcgagcgtggagacggagtacacctgcgagaagtgcggcaagccg
ctcgcgaagcgggagggcagccgcgggccgttcctcggctgcacgggctacccgaagtgc
aagaacatcgtggacatcggccccgacggcaagccggcgaagccgatcgaaacgggtgtg
acgtgcgacaagtgccagtcgccgatgacgatcaagcgcggcccccgtgggccgttcttg
gcctgcaccgcgtacccgaagtgccgcaacgcgaagccgctgtcggccgagttgaaggag
caactcaaggacgtcctcccaccgccgccggtgaagaagccgatgccgaacgtggagatc
acggaagcctgcccggagtgcgaaggcccgatgaagttgcagaagtcccggttcggcggc
ggcaagttcttcctgagttgcgcgaagtacccgaagtgcaaggggacgaagaaggtaacg
cccgaactggagttgaagattcaggaagccgaggccgccgcggcatccgccccggtggaa
gcaacggcgtaa
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