Limnoglobus roseus: PX52LOC_03538
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Entry
PX52LOC_03538 CDS
T06556
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lrs
Limnoglobus roseus
Pathway
lrs03030
DNA replication
lrs03430
Mismatch repair
lrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PX52LOC_03538 (holA)
03430 Mismatch repair
PX52LOC_03538 (holA)
03440 Homologous recombination
PX52LOC_03538 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrs03032
]
PX52LOC_03538 (holA)
03400 DNA repair and recombination proteins [BR:
lrs03400
]
PX52LOC_03538 (holA)
Enzymes [BR:
lrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PX52LOC_03538 (holA)
DNA replication proteins [BR:
lrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PX52LOC_03538 (holA)
DNA repair and recombination proteins [BR:
lrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PX52LOC_03538 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QEL16578
UniProt:
A0A5C1AHY8
LinkDB
All DBs
Position
complement(4177637..4178659)
Genome browser
AA seq
340 aa
AA seq
DB search
MDALAFLDKAAKSKRLPVYVLLGDEDFLKRHCREAILSLVLGDADHDLAVSPFAGDKLEF
STVRNELDTLPFIGPARVVVVEPADLFVSNCRESLEKYVANPSKIGVLILDVKSFPETTK
LAKALPDAAKVVCKSPYANKLPAWCVGWAKAQFKKKLDGDAAEFLVELVGPQMGLLAQEL
EKLSVSVGDKASITAEMVDSLVGRSRAANVFHILDAVGDAKPDVALKLLSELFEEGDDPL
AVMGAMTGQLRKLASVGRQTKEGLSMGVAMDGANVPKWPEARQKFEKQLRHLGRRRLDKL
TDWLVEINLGLKGGSQLPNRLQVERLVVRLARPRDEPSNR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctcgcctttctcgacaaggccgcgaagtcgaaacgcctgccggtgtacgtc
ctcctcggcgacgaagacttcctcaaacggcactgccgcgaggcgatcctgtcgttagtc
ctcggtgatgccgatcacgacctcgcggtgtcgccgttcgccggggacaagctcgaattc
tcgacggttcgcaacgaactcgacacactgccgttcatcggcccggctcgcgttgttgtg
gtcgaaccggccgacctgttcgtttcgaactgtcgcgaatcgctggagaagtacgtcgca
aaccccagcaagatcggcgtgctgattctcgacgtgaagagtttccccgagacgacgaaa
ctggcgaaggctctgcccgacgccgcgaaggtcgtgtgcaagtcgccctacgccaacaag
ctgccggcgtggtgcgtcggctgggcgaaggcgcagttcaagaagaagttggacggcgac
gcggccgagttcctggtggaactcgtcggcccgcaaatgggcttactggcgcaggaactc
gaaaagctgagtgtctctgtcggcgacaaggcgagcatcacggccgagatggtcgattcg
ctcgtcggccgcagtcgggcggcgaacgtctttcacattctggacgccgtcggcgacgcg
aagccagacgtggcgttgaagcttctgtcggagttgttcgaagagggcgatgacccgctc
gccgtcatgggggcgatgaccggccaactgcggaagctcgcctcggtgggccggcagacg
aaggaagggctgtcgatgggcgtggcgatggacggggcaaacgtgccgaagtggccggaa
gcccggcagaagttcgagaagcaactccggcacctcggccgtcgacggctggacaagctg
accgattggctcgtcgaaatcaacctcggcctcaagggcggcagccaactgccgaaccgc
ttgcaagtcgaacgattggtcgtgcggctggcccggccgcgggatgaaccgtcaaatcgt
tag
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