Limnoglobus roseus: PX52LOC_03770
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Entry
PX52LOC_03770 CDS
T06556
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lrs
Limnoglobus roseus
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrs03016
]
PX52LOC_03770
Enzymes [BR:
lrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PX52LOC_03770
Transfer RNA biogenesis [BR:
lrs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PX52LOC_03770
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QEL16797
UniProt:
A0A5C1AF20
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All DBs
Position
4413391..4414911
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AA seq
506 aa
AA seq
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MTEKTDTNDLRAIAHRAMRERGLEPDFPPDAIRQLAGIPAAAHEPDPAVRDLRTLLWCSI
DNDTSRDLDQLTVAEPLADGRVKLLVAVADVDAVVKPLTPIDGHARKNTTSVYTAAQVFP
MLPERLSTDLTSLNEGADRLALVIELVVAADGSVPESAVYRAVVRSRAQLAYRSVAAWLA
GSGPVPEKVAKTAGLDEQLRLQDRIAGIMKSVRDAHGALDLETIAPEAVMQDGRVVDLRQ
DRQNRAQDLIADFMIAANGVSAQFLQKQGRPAFRRVVRTPERWDRIRAVAAGFADHLPVA
PDSKALAAFLTRRRLADALRFPDLSLTVVKLLGAGEYAVQLPGEEPAGHFGLAVREYSQS
TAPNRRFPDLITQRLLKAALAGVPSPYAPTELAALATHCTVQEDAARKVERQVRKSAAAL
FLSGRVGEVFDALVTGASEKGTWVRVLTPPVEGRLLAGYQWLDVGDQLKVRLTGLNVERG
FIDFARWEQDTKRVEQRRISDDATVR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaagaccgacacgaacgatctgcgtgcgatagcacaccgggccatgcgggag
cggggactcgaacccgacttcccgccggacgcgatccgccaactggccggcatcccggcg
gccgcccacgaaccggacccggccgttcgagaccttcggacgctcctgtggtgctcgatc
gacaacgacacgtcgcgcgacctggaccaactcaccgtggccgaacccctcgccgacggc
cgtgtcaaactcctcgtcgccgtcgcggacgtcgacgcggtcgtcaaacccctcacgccg
atcgacggccacgctcgaaagaacacgacgtccgtgtacacggccgcgcaagtctttccc
atgctgccggaacgcctctcgaccgacttgacttcgctcaacgagggcgcggaccgactc
gccctcgtcatcgaactcgtggtcgcggcggacgggtccgttcccgagtccgcggtgtac
cgggccgtcgtccgcagtcgcgcccaactcgcgtaccggagcgtggccgcgtggctcgcc
ggaagtgggccggtgccggaaaaagtcgcgaagacagcagggctggacgagcaactgcgg
ttgcaagatcggatcgcgggaatcatgaagtcggtccgcgacgcgcacggcgctttggac
ctcgaaacgatcgcgccggaggcggtgatgcaggacgggcgggtcgtcgacctccgccag
gaccggcagaaccgcgcccaggatttgatcgccgatttcatgatcgcggccaacggggtg
tccgcccagttcctccagaaacaaggccggccggcgttccggcgggtcgttcggacgccc
gagcggtgggaccgcatccgggcggtggccgcggggttcgcagatcacctcccagtcgcc
ccggattccaaagccctggccgcgtttctgacgcgccgccggttggcggacgcgctgcgg
ttcccggacctgtcgctgaccgtcgtcaagttactcggcgccggtgagtacgccgtgcaa
ctccccggggaggagccggccgggcacttcggcttggccgtgcgggagtacagccagtcc
accgcgcccaaccgccgcttccccgacctgattacgcagcggctgctgaaagccgccctg
gcgggcgttccgtcgccgtacgcgccgaccgaactcgcggcgctggcgacgcactgcacg
gtgcaagaagacgcggcccggaaggtggagcggcaagtgcggaagtccgccgcggccctg
ttcttgtccgggcgggtcggggaggtcttcgacgcgctggtgaccggggcgtccgaaaaa
ggaacctgggttcgggtcctgacgccccccgtcgagggccggctgctggccgggtatcag
tggctcgacgtgggcgaccaactcaaggtccggctgacgggcctgaacgtcgaacgcggc
ttcatcgatttcgcgcggtgggaacaggataccaaacgggttgaacaacggcggattagt
gatgacgcaacagtccgatga
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