Limnoglobus roseus: PX52LOC_04370
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Entry
PX52LOC_04370 CDS
T06556
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrs
Limnoglobus roseus
Pathway
lrs03420
Nucleotide excision repair
lrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PX52LOC_04370
03430 Mismatch repair
PX52LOC_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrs03400
]
PX52LOC_04370
Enzymes [BR:
lrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PX52LOC_04370
DNA repair and recombination proteins [BR:
lrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PX52LOC_04370
MMR (mismatch excision repair)
Other MMR factors
PX52LOC_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
DUF3656
Motif
Other DBs
NCBI-ProteinID:
QEL17383
UniProt:
A0A5C1AGL0
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All DBs
Position
5130748..5133519
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AA seq
923 aa
AA seq
DB search
MPTMNFSPTGEQQAVIDHRGGHLQVIACAGAGKTEAISRRTVSLIEEGTEPGEIIAFTFT
ERAAASLKNRITKRVAESKGLAFLDRLSPMFVGTIHAYCFRLLQDFVPELGNHDLLDENQ
LAGLLSREEKNLELKKIVPEGKHWSSIGEFLRNADIVENELIPSKELGDTPFATSFRKYV
ETLDRYRYLTFGRLITKAVEALETTEVAKKVRANLRHLIVDEYQDINPAQEKLIRLLAKS
PVQLTVVADDDQAIYQWRGSDVKMMQGFSKRYKGTTSLKLSENRRSRPAIIEVANRFAAT
IQPRLEKAMIPCRKAAAPEVVAWSAETDAREAEIIAESIERLGQAGFRYRDIAILFRSVR
TAAPPLLAELDARGIPYRCGGRAGLFQQPEMQALGKLYAWLSDNDWKPQRYSEMQPVDFD
DLLAEIRKHFPKAESEKELRAYLESWKAAASTNASPVNLVRDYYVLLYRLGVRTLDLADP
LAVNRLGTLARFSQLFADFESVTRRARNVEEQGKSTYRGGQDRGKYFYGRLFNYLQFYAL
DSYTEFEGEETFATDAVDILTVHQSKGLEWPVVFVPSLVEGRFPSRKSGNEQNWLLTEDV
FPEEVRKRYEGSETEERRLFYVAMTRARDTLYLSHFEKKSNKFKPSRFLTQLFGDVKRLE
TLPVPKKPEAAPHGTDELPVVTFSELAAYETCPLQYRLSSLLGFQSQLATELGYGKAIHH
ILRHVAEFTQQAGKKPTKKQLEAIFNDHFYLPFANLPLFENLRERANALVHKYIDHHGDD
LLRVWQTERPFELHLGGANVTGRADVILDREGGVTNKLALVDYKTANDSKQDDLFAFQLQ
IYAAAGRGEGLDVVAARVHHLKETRREDVPIDTVRIRTAKARALALVEGIAEGDFPERPG
KEKCTRCDVRAVCKHAACGKYDL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatgaatttctcgccgacgggcgagcagcaagccgtcatcgaccaccgtggc
ggccaccttcaggtcatcgcgtgtgcgggggcgggaaagaccgaggccatctcccgccgg
actgtttcactcattgaggaaggcacggaacccggtgagatcattgccttcacgttcacc
gagcgggcggcggctagtttgaaaaaccggatcaccaagcgggttgcggagtccaaaggg
ctcgccttcctcgaccgcctctcgccaatgttcgtcggcacgattcacgcctattgcttc
cgccttctccaggacttcgtcccggaactcggcaatcacgacttgttggacgaaaaccaa
ttggccggcttgctaagtcgggaagagaaaaaccttgaactcaagaaaatcgtaccggag
ggaaagcactggagttccatcggcgagtttctccggaacgccgacatcgttgagaacgaa
ctcatcccgtccaaggagcttggcgacactccgttcgctacatcgtttcgaaagtacgtc
gagacgctcgaccgctatcgctacctcacgttcggccggctgatcacgaaggccgtagag
gcccttgaaacgacggaagtggccaaaaaagttcgtgcgaaccttcggcacctcatcgtg
gacgagtaccaggacatcaaccccgcgcaggagaagctgatccgcctgctcgcgaagtcc
ccggttcagctcacggtcgtggccgacgacgaccaggccatctaccagtggcgcggctcg
gacgtgaagatgatgcaagggttttccaagcggtacaaggggaccacctccttgaagctg
tccgagaaccgacgctcgcggccggcgatcattgaagttgcgaatcggtttgcggcaacg
atccagccgcggctcgagaaggctatgatcccctgccggaaggccgccgcccccgaagtc
gtcgcgtggtcggcggaaacggacgcccgcgaggcggagatcattgcggaatcgatcgaa
cggctcggacaggccggatttcggtaccgcgacattgcgatcctgttccggtcggtccgt
accgccgccccgccgttgcttgccgaactcgacgctcgcggcatcccgtaccgctgcggg
gggagggccgggttgttccaacagccggagatgcaggccctcggcaaactctacgcctgg
ttgagcgacaacgactggaagccgcagcgatactcggaaatgcagccggtcgatttcgac
gacctcctggccgagattcgcaagcacttcccgaaggccgagtccgagaaggaactgagg
gcttacttggagagttggaaggcggccgcgtcgacaaacgccagtccggtgaacctcgtc
cgcgactattacgttctcctttaccgcctcggcgtccgcaccctcgatctggccgacccg
ctcgccgtcaaccggctcggcacgctcgcccggttctcgcaactgttcgcggatttcgag
agcgtcacgcggcgggcccgcaacgtcgaggaacagggcaaaagcacctaccgcggcggt
caggaccgcggcaaatacttctacgggcggttgttcaattaccttcagttctacgccctg
gacagttacaccgagttcgagggtgaggaaacgttcgccacggatgccgtagacatcctc
accgtccaccagtcgaaggggttggagtggccggtcgtcttcgtgcccagcctggtcgag
ggtcggttcccgtcccgaaagtccggcaacgaacagaactggctactcaccgaagacgtg
ttccccgaggaggtgcggaaacggtacgaggggagcgagacagaggaacgacggctcttc
tacgtcgcgatgacaagggcacgggatacgttgtacctctcgcacttcgagaagaagtcg
aacaagttcaagccgtcgcgattcctcacgcaacttttcggcgacgtgaagcgactcgaa
acgctgccggttccgaagaagccggaggccgcgccgcacggcactgacgagttaccggtc
gtcacgttctcagaactcgcggcctatgagacgtgcccgctccagtaccgcctgagctcg
ctcctcggcttccagtcgcaactcgccacggaactcgggtacggcaaggcgatccaccac
attctccgccacgtcgcggagttcacgcaacaggcgggcaagaagccgacgaaaaagcaa
ctggaagccattttcaacgaccacttctacctgccgttcgccaacctgccgctcttcgag
aaccttcgggagcgggccaacgccctggttcacaagtacatcgaccaccacggcgacgac
ctcctgcgggtctggcagacggaacggccgttcgagttgcacctcggcggggcgaacgtc
accggccgagcggacgtgatcctcgaccgcgagggcggtgttaccaacaaactcgccctc
gtcgactacaagacggcgaacgactcaaagcaggacgacctgttcgcgttccagttgcag
atctacgccgccgccggccggggcgagggattggacgtggtcgcggcgcgggtgcatcac
ttaaaagaaacccggcgcgaggacgtgccgatcgacaccgtccgcatccgcaccgcgaag
gcccgagccctggctctggtcgaagggattgccgaaggggactttccggagcgaccgggc
aaggagaagtgtacgcggtgtgacgtgcgggccgtgtgcaagcacgccgcctgcgggaag
tacgacctgtaa
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