Limnoglobus roseus: PX52LOC_04891
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Entry
PX52LOC_04891 CDS
T06556
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lrs
Limnoglobus roseus
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrs03016
]
PX52LOC_04891
Enzymes [BR:
lrs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PX52LOC_04891
Transfer RNA biogenesis [BR:
lrs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PX52LOC_04891
Prokaryotic type
PX52LOC_04891
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEL17879
UniProt:
A0A5C1AEP3
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All DBs
Position
5628140..5629351
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AA seq
403 aa
AA seq
DB search
MKIKQLPEDFIVEEVTSVTPSGGPFAYYRLDKIGWTTPDALNAVRRRWDIDGRRLSYGGL
KDRHAKTSQHFTIYHGPTRNLQHERVTVTYLGPVAEPFTAQQIGANRFTITMRAIAAGQV
PGIRAAIDEVHASGLPNYFDDQRFGSVGSSQEFVAKEMVRGNFEAALKLALASPYEFDRA
AQKREKATLLEHWGDWPACKAKLDRGHARSLVDYLVHHPTDFRGAVARLKPELQGLYLSA
YQSHVWNRVLALWLTQTLSPDRLARIDLHHGHLPVPTSLPEELVAKWESLQLPLPSARLK
PDVTAAWLPLTEAVLQDEGLALATMKIPGLQKPFFSKGDRKACVRPQNLEAKDDADDQNR
GRRKVILRFELPRGSYATMLVKRVAQLHARPPEPAATSSPPVP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaagcaactccccgaagacttcatcgtcgaagaggttacgtccgtcacgccg
tccggcggcccgttcgcctactaccgcctcgacaagatcggttggacgacgcccgacgcc
ttgaacgccgttcgccggcggtgggacatcgacgggcggcggttgagctacggcggactg
aaagaccgccacgcgaagacgagtcaacactttacgatctaccacggcccgactcgtaac
ctccagcacgaacgggtcacagtcacctacctcggaccagtcgcggaaccgttcaccgcc
caacaaatcggtgcgaaccgcttcacgatcacgatgcgggccatcgccgccggccaagtt
cccggcatccgggcggcgatcgacgaagtccacgcgagcggcctgccgaattattttgac
gaccagcggttcggctccgtcggctcgtcccaagagttcgtggcgaaggaaatggtccgc
gggaatttcgaagcggccctcaaactggcgttggcctcgccctacgagttcgaccgggcg
gcccagaagcgagagaaggcgaccctactcgaacattggggcgactggccggcgtgcaag
gccaaactcgaccgcggccacgcccggagtttggtcgattacctcgttcaccacccgacc
gactttcgcggggcggtcgcccgattgaagccggaattgcaggggctgtacctctcggcc
taccagagccacgtctggaaccgcgtcctggccttgtggctgacgcagaccctttcgccc
gaccgcctcgcccgaatcgacctccaccacgggcacttacctgtgccgacgagtctgccc
gaggaactggtggccaagtgggaatcgttgcagttgccgctgccgtcggctcggctgaag
cccgatgtgacggccgcgtggctgccgctgacagaggcggtgttgcaggacgaggggctg
gccctggcgacgatgaaaatacccggcctgcaaaagccgttcttctcgaagggcgatcgg
aaagcgtgcgtccgcccgcaaaatttggaagcgaaggacgacgcggacgaccagaaccgc
ggccggcggaaggtgatcttgcggttcgaactcccgcgcggcagttacgcaacgatgctc
gtgaagcgggtcgcgcaactacacgcccgcccgcccgaaccggccgctacttcttctccg
ccagttccttga
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