Limnoglobus roseus: PX52LOC_05050
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Entry
PX52LOC_05050 CDS
T06556
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lrs
Limnoglobus roseus
Pathway
lrs03030
DNA replication
lrs03430
Mismatch repair
lrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PX52LOC_05050
03430 Mismatch repair
PX52LOC_05050
03440 Homologous recombination
PX52LOC_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrs03032
]
PX52LOC_05050
03400 DNA repair and recombination proteins [BR:
lrs03400
]
PX52LOC_05050
Enzymes [BR:
lrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PX52LOC_05050
DNA replication proteins [BR:
lrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PX52LOC_05050
DNA repair and recombination proteins [BR:
lrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PX52LOC_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
QEL18036
UniProt:
A0A5C1AJ57
LinkDB
All DBs
Position
5842775..5846299
Genome browser
AA seq
1174 aa
AA seq
DB search
MAARSFCHLHCHTHYSLLDGFNRIPDLVKQTKKLGMNSCAITDHGNLYGAIEFYTKCTDE
GIKPIIGYEAYIAPGDRRERKKIDGNNYFHLTLLAKNNVGWKNLIKLSSLAFLEGFYYHP
RIDKETLEQHKEGLIVLSGCLAGELSDNILKDRTKEAISLIKWYSKVFGDDFYLEIQNNG
LDLQDQCTVAVTDLANKVGIPMVATADAHYLCAHDAEAHDILFCINTERKHNPNKRLYPE
GRMPNPYFIRSPEEMYTLFPKHTEAVGMSQQIADKVDLQLDFKKRHFPVFKTPNQLSEDG
YLRQLCEQGVRERYGENPSQAVWDRLAHELNIIARMRYSAYFLIVWDFVRFAREQGIPCT
ARGSGCGAIVAYALYMSHVCPLEYDLLFERFLDPSRTEPPDIDIDFCQERRELVIDYVKK
KYGHDSVAQIGTFGTLAAKAALKDVGRALDVPLDRVNFLCKLVPMKGAISLDLADAMESP
DFRREYDTDGQVRKLVDVAMKLEGMNRNVGTHAAGVVIANGAITDYVPVQRVVRKSDDKT
GEKGDAKEVVVTTQWEMGIIEKVGMLKMDFLGLRNLTVLDNTVKLIEKTRGVKVDPMAFP
LDDKPTYALLQRGDAKGVFQLESEGIRGLLQRMKPDNIRDLIAVLALYRPGPLGGGMVDA
YVNRKHGRETWDYPHPVMKDILDETYGVQVYQEQVMRVLNRLGGIELSKAYAAIKAISKK
KMDVIEASRAGFVAGAVERGVKAETAAEIFGMIEKFGSYGFNKSHTAAYAQIGYQTAYLK
THYTAEFMAALLSSEIDDGNKRLVMVDHIADAKKLGVDVLPPDINTGWPDFDVYNGQITF
GLTAIKGLGRGAAEEIVKARTAGGRFKDLFDFCERVDTRLVTRAAVEKLIKGGAMDVFGR
RSALTLAVDKAFSSAEQRIADKKRGQKNFFDLFDGGDEPATGATNPGSHGLPDVAEWPEV
ERLKYEKEALDFYISSHPLAQYDDQLRRFRTHTAAEVVKLPQGSTVLLAGMITGLQQRTV
QKNGKRWAMLFLEDFTGQAKCILWSEVYAQFKDKVVDDAIVLFEGAVEWRDGASTGDVIV
KRLLDVDQARREMTRVMLLRMNYAEDAETVRKFEGLRGVLQRARGNCPVHLSVRDKAGKV
AEMKLATDYMIDPNKVIVDELEQILGPGNVIFTK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgctcgttctgccacctccactgccacacgcactacagcctcctcgacgga
tttaaccgcatcccggacctggtgaagcagacgaagaaactcgggatgaactcctgcgcg
atcaccgaccacggcaacctctacggcgcgatcgagttctacacgaagtgcaccgacgaa
ggcatcaagccgatcatcggctacgaggcgtacatcgcccccggtgaccgccgcgagcgg
aagaagatcgacggcaacaactacttccacctgacactgttggcgaagaacaacgtcggc
tggaagaacctcatcaaactgtctagcctggcgtttctcgaaggcttttactaccacccg
cggatcgacaaggagacactggaacagcacaaggaagggctgatcgtcctcagcggatgc
ctcgccggcgaactgagcgacaacattctgaaggaccgcacgaaggaggcgatcagcctc
atcaagtggtactcgaaagtcttcggcgacgacttctatctcgagattcagaacaacggc
ctcgacttgcaggaccagtgtacggtggccgtgaccgatctggcgaacaaggtcggcatc
ccgatggtggcgacggccgatgcgcactacctctgcgcccacgacgcggaagctcacgac
atcctcttctgcatcaacaccgagcggaagcacaacccgaacaagcggctctacccggaa
gggcggatgccgaatccgtacttcatccgcagcccggaggagatgtacaccctcttcccg
aagcacacggaagcggtcggcatgtcgcagcagatcgccgacaaggtcgacctacaactc
gacttcaagaagcggcacttcccggtttttaagacgccgaaccaattgtcggaagacggc
tacctccgccaactctgcgaacagggcgtccgggagcggtacggcgaaaacccgtcgcag
gccgtgtgggaccgcctcgctcacgagttgaacatcatcgcgcggatgcgttactcggcc
tacttcctcatcgtctgggacttcgtccggttcgcccgcgagcagggtatcccgtgtacg
gcccgcggctccggctgtggcgcgatcgtggcctacgcgctctacatgagccacgtctgc
ccgttggaatacgacttgctgttcgagcggttcctcgacccgagtcggacggaaccgccg
gacatcgacatcgacttctgccaggagcggcgggagttggtcatcgactacgtgaagaag
aagtacggccacgacagcgtcgcccagatcggtacgttcggcacgctcgcggcgaaggcg
gccttgaaagacgttggccgggcgctcgacgtgccgctggatcgggtgaacttcctgtgt
aagctcgtgccgatgaagggggcgatctcgctcgacttggccgacgcaatggagtcgccc
gacttccgccgcgagtacgacaccgacggccaggtgcggaagctcgtggacgtggcgatg
aagctcgaagggatgaaccgcaacgtcggcacgcacgccgccggcgtggtcatcgccaac
ggggcgattactgattacgtgcccgtgcagcgggtcgtccgcaagagcgacgacaagacc
ggcgagaagggcgacgcgaaggaagtcgtcgtcaccacgcagtgggaaatgggcatcatc
gaaaaggtcgggatgctcaagatggacttcctcgggttgcggaacctcacggttctcgac
aacacggtcaagctcatcgaaaagacccgcggcgtcaaagtcgacccgatggcgttcccg
ctcgacgacaagccgacctacgcgctgctccagcgcggcgacgcgaagggcgtgttccag
ctcgaaagcgagggcatccgtggcctccttcagcggatgaagccggacaacatccgcgac
ctgatcgcggtgctggcgctctaccgccccggcccgctcggtggcggcatggtcgatgcg
tatgtgaaccgcaagcacggccgcgagacgtgggactacccgcacccggtcatgaaggac
atcctcgacgaaacctacggcgtgcaggtgtaccaagagcaggtgatgcgcgtcctcaac
cgcctcggcggcatcgaactgtcgaaagcatatgcggccatcaaggcgatcagcaagaag
aagatggacgtgatcgaggccagccgagcggggttcgtggccggggccgtcgagcgcggg
gtgaaggcggagacggccgcggaaatcttcggcatgatcgaaaagttcggctcctacggc
ttcaacaagagccacacggcggcctacgcgcagatcgggtatcagaccgcgtacctgaag
acgcactacaccgccgagttcatggcggccctgctgtcgagcgaaatcgacgacggcaac
aagcggctcgtaatggtcgatcacatcgccgacgcgaagaaacttggtgtggacgtgctg
ccaccggacatcaacaccggctggcccgacttcgacgtgtacaacgggcagatcaccttc
ggcctcacggcgatcaagggcctcggccgcggggcggcggaggagatcgtgaaggcccgc
acggccggcggtcggttcaaggacctgttcgacttctgcgagagggtggatacccggctc
gttacgcgggcggccgtcgagaagctcatcaaggggggggcgatggacgtgttcggccgc
cggtccgccctgacattggccgtcgataaggccttctcgtcggcggagcagcgcatcgcg
gacaagaagcgtgggcagaagaacttcttcgacctgttcgacggcggcgacgaacccgcg
acgggggccacgaaccccggcagccacggtctgccggacgtggccgagtggccggaggtc
gagcgactgaagtacgagaaagaagccctcgacttttacatctcgtcccacccgctcgcg
cagtacgacgaccaactgcggcggttccgcacccacacggccgccgaagtggtgaagttg
ccgcaaggatcgaccgttctgctcgctggcatgattaccgggttgcaacagcggacggtt
cagaagaacggcaagcggtgggcgatgctcttccttgaagacttcaccgggcaggcaaag
tgcatcctgtggagcgaggtttacgcgcagttcaaggacaaggtggtcgacgacgcgatc
gtgctctttgagggggcggtcgagtggcgcgacggggccagcaccggcgacgtgatcgtg
aagcggctgttagacgtggatcaagcccgccgcgagatgacgcgggtgatgttgcttcgc
atgaactacgccgaggacgcggaaacggtgcggaagttcgagggcctacgcggcgtcctc
caacgagcacgcggcaactgcccggttcacctctcggtccgcgacaaggcggggaaagtc
gccgagatgaaactcgcgaccgactacatgatcgacccgaacaaggtcatcgtcgatgag
ctagagcagattctcgggccggggaacgtcatctttacgaagtga
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