Limnoglobus roseus: PX52LOC_06477
Help
Entry
PX52LOC_06477 CDS
T06556
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lrs
Limnoglobus roseus
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrs03019
]
PX52LOC_06477
Messenger RNA biogenesis [BR:
lrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PX52LOC_06477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
OB_YrrC
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QEL19406
UniProt:
A0A5C1AN40
LinkDB
All DBs
Position
complement(7320539..7321564)
Genome browser
AA seq
341 aa
AA seq
DB search
MARDKPRPPVAKLHELAVGPPASDFFALLVEKKKGTTRDGKPFYSCRFRDHRRTVSCVIW
ADAPLYTECEQNWHAGMIYKVRGVFAEHEKYGPQIEVVRLRESTTADKEDGLNEAEFIER
SRFDSDAMFTDLKALVQAEIRDEPLKVLIDGLLDAHAEPLKKLPATARHFYPFPGGWLEH
VLNVTRNCCWLADQYAERFPDLKPFNRDLVVAGAVLHDIGRVAEYTITLPTLPPESTVAG
HLFGHIQLSRDLVRDAAKGVEGLNAELVQLLEHVILAHLTRPEWGSPRLPMIPEVLILHH
ADDLDAKFEMFARHLTRDTGEGLVTERDPILNKQLLKQRSV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgataagccccggccgccggtcgccaaactccacgaacttgcggtcggcccg
ccggcgtcggacttctttgccctactcgttgagaagaagaagggcacgacccgcgacggc
aagccgttctattcgtgccgcttccgcgaccatcggcggaccgtcagttgcgtgatttgg
gccgatgccccgctgtacacggagtgcgagcagaactggcacgcggggatgatctacaag
gtccgtggggtgttcgcggagcacgaaaagtacgggccacaaatcgaggtggtgcgactt
cgcgagtccacgaccgcggacaaggaagacgggttgaacgaggccgagttcatcgagcgg
tcccggttcgattcggacgcaatgttcaccgacttgaaggcactcgtgcaggcggaaatc
cgagacgagccgttgaaggtgctgatcgatggtctgttggatgcccacgcggagcccctg
aagaagctcccggcgacggcccgacacttctacccgttccccggcgggtggctggaacac
gttctcaacgtcacgcggaactgttgctggctcgcggaccaatacgccgaacggtttccg
gatttgaagccgttcaaccgtgatctggtcgtcgcgggggcggtactgcacgacatcggg
cgagtcgccgagtacaccatcaccctgccgacgttgccgccagaatcgacggtcgccggc
cacctgttcgggcacattcaactttcgcgcgatctggtgcgcgacgccgcgaagggcgtg
gaagggcttaacgccgagctagttcagttgttggaacacgtgattcttgcgcacctgaca
cggccggagtggggttcgccgcggttgccgatgatcccggaggtgctgatcctacaccac
gccgatgatttggacgcgaagttcgaaatgttcgcccgccatctcacgcgagatacgggc
gagggattggtaacagaacgcgacccgattctcaacaagcaactcttgaaacagcggagc
gtctga
DBGET
integrated database retrieval system
