Limnoglobus roseus: PX52LOC_08162
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Entry
PX52LOC_08162 CDS
T06556
Symbol
sdhA
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lrs
Limnoglobus roseus
Pathway
lrs00020
Citrate cycle (TCA cycle)
lrs00190
Oxidative phosphorylation
lrs00650
Butanoate metabolism
lrs00720
Other carbon fixation pathways
lrs01100
Metabolic pathways
lrs01110
Biosynthesis of secondary metabolites
lrs01120
Microbial metabolism in diverse environments
lrs01200
Carbon metabolism
Module
lrs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lrs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PX52LOC_08162 (sdhA)
00650 Butanoate metabolism
PX52LOC_08162 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PX52LOC_08162 (sdhA)
00720 Other carbon fixation pathways
PX52LOC_08162 (sdhA)
Enzymes [BR:
lrs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PX52LOC_08162 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
NAD_binding_8
AlaDh_PNT_C
Pyr_redox
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QEL21033
UniProt:
A0A5C1ASG3
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All DBs
Position
9263842..9265761
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AA seq
639 aa
AA seq
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MIQLDSKVPAGSVPEKWTNFKKKQQLINPANKRKYTVIVVGTGLAGASAAASLAELGYNV
QAFCFHDSPRRAHSIAAQGGINAAKNYRNDGDSVWRLFYDTIKGGDFRAREANVHRLAEV
SVNIIDQCVAQGVPFAREYGGLLDTRSFGGAQLQRTFYCRGQTGQQLLLGAYQALARQIA
AGNVKMFPRTEMLDLVTVDGRAKGIVVRNLISGEVKSYAADAVVLATGGYSNAFYLSTNA
IGCNVTATWRAYKRGAAFANPCYTQIHPTCIPVVGDHQSKLTLMSESLRNDGRVWAPKNK
ADCGKHPSEIAEADRDYYLERKYPSFGNLAPRDISSRAAKEACDDGRGVGPGGRGVYLDF
GAAIAKQGKAKIVEKYGNLFDMYQRITGENGYERPMRIYPALHYTMGGLWVNYELMSNVP
GLFVIGEANFSDHGANRLGASALMQGLADGYFVLPYTLTHWLAGETPGTLPTTHADFKRT
ESEVTDRLNKLLAAKGKKTAVEYHREAGKLLWENVGMARTKKSCEEAAKALRQLQAEFLH
NLTVPGSGTELNMALERANRVWDFLEFGQLLAMDAAQRDESCGGHFRSEYQYPDGEAKRD
DEKFSHVAAWTFNGPDATPSRNVEELTWDAVKPSVRSYK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatccaactcgattcgaaagttccggccggctcggtccccgagaagtggacgaacttc
aagaagaagcaacaactcatcaaccccgcgaacaagcggaagtacaccgttatcgtcgtc
ggcacggggttggccggggcgagcgcggcggcgtcgctggcggaactcggctacaacgtg
caggcgttctgcttccacgacagcccgcggcgggcgcacagcatcgccgcccagggcggg
atcaacgcagccaagaactaccgcaacgacggcgacagcgtctggcggcttttctacgac
accatcaagggcggcgacttccgggcacgcgaggccaacgtccaccgcctggcggaagtg
tcggtcaacatcatcgaccagtgcgtcgcgcaaggcgtgccgttcgcccgcgagtacggc
ggcctgctcgacacccgcagtttcggcggcgctcaactccagcgaaccttctactgtcgt
ggccagacgggccagcagttgctcctcggcgcgtaccaggctctcgcccggcagatcgcc
gccggcaacgtgaagatgttcccccgcaccgagatgctcgacctcgtcaccgtggacggc
cgagcgaaggggatcgtcgttcgcaaccttatcagcggcgaagtgaagtcttacgcggcc
gacgccgtggtgctggccaccggcggctactcgaacgccttctacctcagcacgaacgcc
atcggctgtaacgtcaccgcgacgtggcgggcgtacaagcgaggggctgcgttcgccaac
ccgtgctacacgcagattcacccgacctgcatccccgtcgtcggcgaccaccagtcgaag
ctcacgctcatgagcgagagcctgcggaacgacggccgcgtctgggcgccgaagaacaag
gccgactgcggcaagcacccgagcgaaatcgccgaggccgatcgcgactactacctcgaa
cgcaagtacccgagcttcggcaaccttgccccgcgggacatctccagccgggcggcgaaa
gaggcgtgcgacgacggccgcggcgtcggccccggcggtcggggcgtgtacctcgacttc
ggcgccgccatcgccaagcaggggaaagcgaagatcgtcgagaagtacggcaacctcttt
gacatgtaccagcggatcaccggcgagaacggctacgagcggccgatgcgcatctacccc
gccctccactacacgatgggcgggctgtgggtgaactacgaactgatgtcgaacgtgccc
ggcctgttcgtcatcggcgaggcgaacttctccgaccacggggccaaccgcctcggggcg
tcagccctcatgcaagggctggccgacggctacttcgtgctgccgtacacgctcacccac
tggctggctggcgaaacgcccggcaccttgcccacgacgcacgccgacttcaagcggacc
gagagcgaagtcaccgaccgcctgaacaagctcctcgcggcgaaaggaaagaagacggcc
gtggagtaccaccgtgaggccggcaagctgctctgggaaaacgttggcatggcccgcacc
aagaagagttgcgaggaggccgcgaaggcgctccgccaactgcaagcggaattcctgcac
aacctgaccgtgcccgggtccggcactgagttgaacatggccctcgaacgggccaaccgc
gtctgggacttcctggagttcggccaacttctcgcgatggacgccgcccagcgggacgag
tcgtgcggcggccacttccgctcggagtaccagtacccggacggtgaggcgaagcgcgac
gacgagaagttcagccacgtcgccgcctggacgttcaacggcccggacgccaccccgagc
cgcaacgtcgaagaactgacgtgggacgctgtgaagccgtcggtgcgatcgtacaaatag
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