Limosilactobacillus reuteri I5007: LRI_0722
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Entry
LRI_0722 CDS
T02701
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lrt
Limosilactobacillus reuteri I5007
Pathway
lrt03030
DNA replication
lrt03410
Base excision repair
lrt03420
Nucleotide excision repair
lrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRI_0722
03410 Base excision repair
LRI_0722
03420 Nucleotide excision repair
LRI_0722
03440 Homologous recombination
LRI_0722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrt03032
]
LRI_0722
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_0722
Enzymes [BR:
lrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRI_0722
DNA replication proteins [BR:
lrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LRI_0722
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LRI_0722
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRI_0722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGN98931
UniProt:
R9WFW3
LinkDB
All DBs
Position
737654..740320
Genome browser
AA seq
888 aa
AA seq
DB search
MTKQLLLIDGNSIVFRAFFAMHNQMDKFTNKDGLHTAAIYGFKLMLDHVLQNFKPDTALV
AFDAGKVTFRTKMYDDYKGGRNKTPNELTEQIPYVRELIKDSGLHSYELANYEADDIIGT
LAKQADDAGYKTLIVTGDRDLTQLASENTTVAVTHKGVTDTEHYTPAHVEEKLGITPRQI
IDMKALMGDSSDNYPGVTKIGEKTAIKLVKQFGSVEELYDHIDDLKKSKMKEHLIEDEEI
ARQCKTLATILRDAPLKIGLDDLQYQGPQTDDLIKFYKEMGFKSFLKKMDIDGAGDEDEA
EIAPIDYTVLTKDNLDELGQLTGEVSFYLEMPAENYHTSPFAGFVVGNEGHWFTSRDVDL
LKEAPLKDLLQSDSVKKNVFNAKAQIVGLHRLGIPLENINFDLLLASYLLNTNDNSNDLG
QVAQEHGYDDVRTDEEVYGKGAKRAVPDDDETFFSHLATKARAIEHLRKDFFAKLDENKQ
TPLYTDIELPLTRVLAKMEIAGVHVDAQTLKDMGSKLTERLSEIESQIYQEAGEEFNINS
TKQLGHILFEKLKLPVIKKTKTGYSTAVDVLEKLADKSPIVEQILEYRQIAKLQSTYITG
LLKVIHSNDQKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLPEGRLIRKAFVPSHEGWQIF
SSDYSQVELRVLAHITGDKNLQEDFKNDEDIHASTARRIFHLAPDAEIDRNMRRRAKAVN
FGIVYGISDYGLAQRIHVSRAEAHEFIQNYFHEFPGVKKYINDTIAFAKENGYVETITHR
RRYLPDIHAKSFSKRSFAERTAMNTPIQGSAADIIKIAMIRMQDELEKRHLKAKMLLQIH
DELVFEAPKEEIPVLSELVPKVMDSAVKLDVPLKVDSKYGDTWYDLKK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaattattgttaattgacggaaatagtattgttttccgggcattttttgcc
atgcataaccaaatggacaagtttacaaataaggacggcttgcatacggctgcaatttat
ggctttaagttgatgcttgaccatgtgttgcaaaactttaaaccggatacggctttagta
gcctttgatgcagggaaggtaaccttccggacgaaaatgtatgatgactataagggtggt
cgaaacaagacgcctaatgaattgaccgagcaaatcccttatgtgcgtgaattgatcaaa
gactctgggttacatagttatgaattagctaactatgaggctgacgatattatcggtact
ttggctaagcaggcggatgatgctggctacaagacgttgatcgtaactggagatcgggac
cttacccagttagcaagtgaaaatacaaccgttgccgttacccacaagggagttactgac
acggaacactatacgccagcgcatgtcgaagaaaaattaggaattaccccacgccaaata
attgatatgaaggcattgatgggtgattcttccgataattatcctggtgtaactaaaatt
ggagaaaagacggcgatcaaacttgtgaaacagtttggttcggttgaagagctttatgac
catattgatgacctcaaaaagagtaagatgaaagaacatttgattgaggatgaagagatt
gctcgccaatgtaagacgttagcgacaattcttcgggatgctccgctcaagattggccta
gatgatttgcaataccaaggtccacaaacggatgacttgattaagttttataaagagatg
ggctttaaatctttcttgaaaaagatggatatcgatggggccggcgacgaagatgaagct
gagattgctccaattgactacacggttttaactaaggataacttagacgaactaggacaa
ttgacgggtgaagtcagtttttaccttgaaatgccagcagaaaactaccacacgtcacca
ttcgctggttttgtggttggcaatgaaggacactggtttacaagtcgagatgtggacctg
cttaaagaagcgcctctcaaagatttactccagagtgatagcgttaagaagaatgtcttc
aatgccaaggcgcaaatcgttgggcttcatcgcctcggtattccgcttgaaaatattaat
tttgatctgcttttggcatcttaccttctaaatactaatgacaatagtaacgacctggga
caagtagctcaggaacacggttatgatgatgtacgaacagatgaggaagtttatggtaaa
ggtgctaagcgtgctgtgcctgatgatgacgagaccttctttagtcacctggctacgaaa
gcgcgggcaattgaacatctgcgtaaggatttttttgccaaattagatgaaaataagcaa
acgccgctatataccgatattgaattaccgctaacccgggttcttgcaaaaatggaaatc
gcgggtgtccatgtagatgcacaaactttgaaagatatgggtagtaaattaactgaacgg
ctatcagaaattgaaagtcagatctatcaagaagctggcgaggaatttaacattaactcc
actaagcaactaggccatattctgttcgaaaaattgaaattgccagtgatcaaaaagacc
aagaccggttattccactgcagttgatgtgctggaaaagttagctgataagtcaccaatt
gttgagcaaattttggaatatcggcaaattgctaagcttcaatctacttatatcactggt
ttgctgaaagttattcattcaaatgaccagaagatccatacgcgctacttacaaacatta
acgcaaactggtcgcttgtcctctgttgatcctaacctgcaaaatattccagtacggttg
ccagaaggacgcttaatcagaaaggcatttgtgcctagtcatgaaggctggcaaatcttc
tcttcagattattcgcaagttgaattacgggttcttgcccatatcactggtgataaaaac
cttcaggaagactttaagaatgatgaagatattcacgccagtacggctcgtcggattttc
catttagcccccgatgccgagattgaccgtaatatgcggcggcgggcaaaagcggttaat
ttcggaattgtttatgggattagtgattatggattggcacaacggattcatgttagccgc
gcggaagctcatgaatttattcaaaattacttccatgaattccccggtgtaaagaaatac
atcaatgatacgattgcgtttgctaaagagaatggttatgttgagacgattactcaccgc
cgtcgttacttaccagacattcatgccaaaagtttcagcaagcgatcatttgcagagcgg
acagcaatgaatactccaattcaggggagcgctgctgatatcattaagattgcgatgatc
cggatgcaagatgagcttgagaaacgccatctaaaggcaaaaatgctcttgcagattcat
gatgaattagtctttgaggccccaaaggaagaaatcccagttctatcggaattagtgcca
aaagtaatggattcggccgttaagttggatgtgccgcttaaagtagatagtaagtatggg
gatacctggtatgaccttaaaaaatag
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