Limosilactobacillus reuteri I5007: LRI_0723
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Entry
LRI_0723 CDS
T02701
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lrt
Limosilactobacillus reuteri I5007
Pathway
lrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRI_0723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_0723
Enzymes [BR:
lrt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LRI_0723
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRI_0723
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRI_0723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_3
Zn_Ribbon_TF
Clavanin
Zn_ribbon_TFIIB
DZR
Zn_ribbon_8
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AGN98932
UniProt:
R9WIT5
LinkDB
All DBs
Position
740335..741165
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL
LFRFTNDLTMISHLRMEGKYYNQPIGGPIDKHTHVVFEFTDGTELCYQDTRKFGRMTLVK
TGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLNQRHVAGLGNIYVDEVL
WMTGINPEQPANTLTANQIAELRENIIKELATAIKYKGTTVHSFTNAFGDAGAFQDRLKA
YGHAGDECPRCGTKMVKIKVAERGTTFCPHCQVLKE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaactgttcgccgcggtttgctgaagattgccgctaag
cgtaaaattaacgcgatcgatgtttattatggtaaaacgattaccaatgacgttgaagat
tttcggcaggcgttgattggccagacgattgaaaatgttgatcggcgaggaaaatatctt
ctttttcgttttactaatgatttgacgatgatttcacatcttcgtatggaaggaaaatat
tacaaccaaccgattggcggaccaattgataaacatacccatgttgtctttgaatttacg
gatggtacggaattatgttaccaagacacccgtaaatttggccggatgacattggtaaaa
accggtgatgagatgaatgtcggcggattgaagacgattggccctgaaccgacagaagat
gcctttaccttgccatactttacagctgaattaaaaaagagtcgggggaagattaagcca
ttcttgctcaatcagcgtcatgtcgccggtctgggtaacatttacgttgatgaggtacta
tggatgacggggataaatccggagcaaccagccaatactttaacagctaaccagattgct
gaattacgggaaaatattatcaaagaattggcgacagcgattaagtacaagggaaccact
gtgcatagttttacgaatgcatttggtgatgccggagctttccaagatcgcttaaaagct
tatggtcatgcgggagatgaatgtccgcgctgtggcacgaaaatggttaaaattaaggtt
gctgaacgcggaacgaccttttgtccccactgtcaagtattgaaggaatag
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