Limosilactobacillus reuteri I5007: LRI_0813
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Entry
LRI_0813 CDS
T02701
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lrt
Limosilactobacillus reuteri I5007
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LRI_0813 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrt03019
]
LRI_0813 (rnc)
03009 Ribosome biogenesis [BR:
lrt03009
]
LRI_0813 (rnc)
03036 Chromosome and associated proteins [BR:
lrt03036
]
LRI_0813 (rnc)
Enzymes [BR:
lrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LRI_0813 (rnc)
Messenger RNA biogenesis [BR:
lrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRI_0813 (rnc)
Ribosome biogenesis [BR:
lrt03009
]
Eukaryotic type
90S particles
RNase
LRI_0813 (rnc)
Prokaryotic type
rRNA processing factors
LRI_0813 (rnc)
Chromosome and associated proteins [BR:
lrt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LRI_0813 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_MRPL44
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AGN99022
UniProt:
R9WJ06
LinkDB
All DBs
Position
819712..820413
Genome browser
AA seq
233 aa
AA seq
DB search
MIEELQDYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVS
EYIYKRFPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLC
DIFESFIGALYLDQGRPAVEKFVQRVIFPKLDMGWFDHAVDAKTSLQEFLQRDGDIAIEY
HLVEESGTENDPEFKVNVTANGDVIGEGKGSSKKHAEMQAAQQALDNMRNKNK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagaattacaagactacctggccaaggaatttaatattcattttgataatcct
gctttattagcagaggcttttactcaagcttcgtatgtaaatgaacatcctaaccaagga
ttaaaatattacgaacggattgaatttcttggcgatgctgtgttggaactgatcgtttca
gaatatatttataaacgtttccctgaattaccgcagggaaaacttactcgcttaagagcg
gcaatggtatgtgaagatagtttttctaaatttgccaaggaatgtcactttgatcaatac
attcgcttgggtcatggtgaggaaatggccggcgcaagagaacgaccaggcttgctatgt
gatatttttgaatcatttattggtgccctctatttagatcaaggccgaccagcagtcgaa
aaatttgtccaacgggttatctttcctaaacttgatatgggctggtttgatcatgctgtt
gatgctaagactagtcttcaagaatttcttcaacgcgacggtgatattgccattgaatat
catttagtagaggaaagcggaacagaaaacgaccctgaatttaaagtaaacgttactgct
aacggtgacgttatcggtgaaggaaagggttcatcgaagaagcatgctgaaatgcaagca
gcacaacaggcacttgataatatgagaaataaaaataaatag
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