Limosilactobacillus reuteri I5007: LRI_0928
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Entry
LRI_0928 CDS
T02701
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lrt
Limosilactobacillus reuteri I5007
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_0928
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LRI_0928
Archaeal homologous recombinant proteins
LRI_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
UDPGT
AAA_21
GTP_EFTU
FERM_C_FAK1
Motif
Other DBs
NCBI-ProteinID:
AGN99137
UniProt:
R9WJD7
LinkDB
All DBs
Position
941027..944128
Genome browser
AA seq
1033 aa
AA seq
DB search
MRPLTIELHYFGPYEHQVIDFTQFTERSLFLVAGNTGAGKTTIFDAMCYALFGQTTNDRD
RSAAALRSDFAPADQETMVKFTFEHQDLKYQIMRRPKQVLKGRRDNLVEHNQAVDLIYPL
ESDHPQEITKIKEADTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKETLLRDLFN
TSRYEQWATQLKNDLREQKKSLTTQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLSRLK
ANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKVGKTLQAQAGEIQETKQQ
VKVLEWYQEHQTEYQRWKDGEKRLQKLTLDNKFLHEDLRNLQKQQQTIETDLQQTSKQQE
EIDQLQTEVADLTNKLPFFDDRDKLRSTVDELQTHLKQQKKQQAASQKKLQDAQQQLTVI
TNNLKEHENLGEVQVHIAKQEALQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGDAEK
LVQKSQGELDDLNDRFARHQIAILAQKLKPATPCPICGSLDHPHPASLADDGELVTEAQV
KAATVKAQQNRSRLDQLKEQVRQSVAQIANLTTQVETRQANLAELLGDNELPSDWEGQIE
SHAQKLAEMKTDLDRIEQQVKEWRQEEEKLQQESKFSQEELDKIDESVNRCKQDLIAKQT
ILKEKAASLPAKFPTKEAADKRIQTDQLKIKAFNNQLESLQQQRQENAKKLAGTNSRIDQ
TKEELATQTTQQDNLHRYLVNLLAQYDVQLKWNFWQEASEQVATLSSLREQVTTFENQVQ
DNQSQQERLTKAINSHPMPDITSTQTKLNAEREQLRQYQQEIGQLTAQYKQLEETDQKII
KAVEKTGKLDQEINELQTLTDVVTGNTENHVSLERYVLQAYFQDVLVAANIQLDRLTNSR
YQFELATESHGAGAKWSGLEVNVYDDNAGRTRSARTLSGGESFMASLALALALCQIVQEQ
SGGIKIDALFIDEGFGSLDQQALEDALHSLQELEGHRMIGIISHITELEEQIPDQLIVRS
RNGRSYVAYQHEI
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccattaacgattgaactacattactttgggccgtatgagcatcaagtgattgac
tttacgcagttcacagagcgttccttatttctggtagcagggaatactggtgcggggaaa
accacgatttttgatgcgatgtgttatgcgctttttggtcaaacaaccaatgatcgtgat
cggtcggctgctgctttgcgttctgatttcgcaccagctgatcaagaaacaatggtgaag
tttacctttgaacaccaagaccttaaatatcaaattatgcgtcgtcctaaacaggtttta
aagggacgccgcgacaatttagttgaacataatcaagccgttgatcttatttacccgctt
gaaagcgatcatccccaggaaatcactaaaatcaaggaggcagacacgtttattactgac
ttgctcaatctgacccgtgatcaatttaagcagattgtccttctccctcaaggaaagttt
cggcagtttcttgattcagatagcaatactaaggaaacccttctacgtgacctctttaat
acgtcccgttatgagcagtgggcaacgcagctaaaaaatgatttgcgtgaacagaagaag
tcattgacgactcaagaaacaaaacttcaatcattaaaggaaacagtaaccgcgattgat
gcgcaattaacaactaaagaatggttagcggaagcaaaaaattacttatcccgactaaaa
gctaatcttgaacacttgggcgatgatgagcagcaacagcaaaagaaagttgatcagctt
gatgcccaacttcatactgagcaagagttgaagaagaatattgaggagttagctgaactt
atcaaggttggaaaaacactgcaagctcaagcaggagagatccaagaaacaaagcagcaa
gtaaaagtccttgaatggtatcaagaacaccagacagaatatcaacggtggaaagatggc
gaaaaacgtctccaaaaattaacgttagacaataaatttctccatgaggacctgcgcaac
cttcaaaagcaacagcaaacaattgaaaccgacctacaacaaacgagtaagcagcaagaa
gaaattgatcagcttcaaactgaggtcgccgacttgacgaataaactcccattcttcgat
gatcgagataaactaagatcaactgtcgatgaactacaaacacacttaaagcagcagaaa
aaacagcaagctgcttcccagaagaagttgcaagacgctcaacagcaattgacggttatt
actaataatttaaaagagcatgaaaacttgggtgaggttcaagttcacatagcaaaacaa
gaagctcttcaggaaaaattaacgactgctggaaaagatttaaagcaattagaaacaaaa
cttttatctgaaaagaaaaattgcgcgaaattagagcaaaagcagggggatgctgaaaaa
ctcgttcaaaaatcgcaaggtgagttggatgacttaaatgatcgctttgcccgtcaccaa
attgccattcttgctcaaaaattaaagccggccaccccttgcccaatttgtggatcactt
gaccacccccatccggcaagcttagcggatgatggtgaattggtaacggaagcgcaagtt
aaagcggcaaccgttaaagctcaacaaaaccgtagtaggcttgatcagttaaaagagcaa
gttcgccaaagcgttgcccaaattgcgaacttaacaacacaggtagaaactcggcaggca
aatttagctgaactgttaggggataatgaattaccgagtgattgggagggacaaatcgaa
agtcacgctcaaaaactagcagaaatgaagactgacctcgatagaatagaacaacaggtt
aaagaatggcgccaagaagaggaaaaattgcaacaagaatccaagttctctcaagaagaa
ttagataaaatagacgaaagtgtgaaccgctgcaaacaggatttaatcgccaagcagact
attctgaaagaaaaagcagcttctttaccagcaaaatttcctactaaagaagctgctgac
aagcgaattcaaactgatcaactaaagatcaaagcctttaataaccagcttgagtcattg
caacaacaacgacaagaaaatgccaaaaaattagcagggacaaatagtcggatcgaccag
actaaagaagaacttgccacccaaacgacgcaacaggataacttacaccgatatcttgtg
aatcttttagcccaatatgatgtccaacttaaatggaatttctggcaagaagctagtgaa
caagtggcaacattgtcatctttacgtgaacaggtaacgacctttgagaatcaagtccag
gataatcagtcccaacaagagcggttgactaaggccatcaatagtcatcccatgccagat
attacatcaacgcagacaaaacttaatgctgagcgtgaacaacttcggcaatatcagcaa
gaaattggtcagttaactgctcagtataagcaattagaagaaacggatcaaaagattatt
aaggcagtcgaaaaaactggaaaacttgatcaagaaattaatgaattacaaacattaaca
gatgttgtgactgggaataccgaaaatcacgttagcctagaacggtatgtattacaggca
tattttcaagatgtcttagtagcagccaatattcagttagaccggttaactaatagtcgc
taccagtttgaattagcaacggaaagtcatggggccggtgccaagtggagtgggctagaa
gttaatgtatatgatgataatgctggcagaacgcgaagtgcccggacgctttctggtggt
gaaagttttatggcttcgcttgctcttgctttagctctctgccagattgtccaagagcaa
agtgggggaattaagattgatgcgctctttatcgatgaaggatttggttcccttgatcag
caagctcttgaagatgctcttcattcccttcaagaacttgaaggccaccggatgattgga
attatcagtcatatcactgaacttgaggagcaaattccagatcagttaattgttcgatca
agaaatggccgtagttatgtcgcataccagcatgaaatataa
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