Limosilactobacillus reuteri I5007: LRI_1557
Help
Entry
LRI_1557 CDS
T02701
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lrt
Limosilactobacillus reuteri I5007
Pathway
lrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRI_1557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_1557
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRI_1557
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LRI_1557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
T2SSE
AAA_5
AAA_19
AAA_7
AAA_25
AAA_22
AAA_30
AAA
DUF8810
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGN99766
UniProt:
R9WIN2
LinkDB
All DBs
Position
complement(1594598..1596613)
Genome browser
AA seq
671 aa
AA seq
DB search
MIYRQPDKKFELVSEYKPTGDQPQAINQLTKGIEDGEKAQILLGATGTGKTFTISNVIAN
VNKPTLILSHNKTLAGQLYGEMKKFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASI
NDEIDKLRHSATTSLLERNDVIVVASVSSIFGLGDPREYQNSVLSLRVGQEIERDRLLTE
LVNIQFDRNDIDFQRGRFRVRGDVVEIFPASRDERALRVEFFGDEIDRIREVDALTGEVI
GDRDHVSIFPATHFMTNEEVMDRALPQIEADMKKQVKKFTDEGKLLEAERIQQRTTYDIE
MMREMGYTNGIENYSRYMDGRKPGEPPYTLLDFFPKDFLLVVDESHQTMPQVRGMYNGDR
ARKQMLIDYGFRLPSALDNRPLKLPEFEQHVNQVVYMSATPGPYEMEQTDHIAQQIIRPT
GLLDPTVEVRPVMGQIDDLVGEINKRIEKNERVFVTTLTKKMSEDLTDYLKDMGLKVKYL
HSDIKTLERTQIIRDLRLGKFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNENGAVIMYADTVTDSMQKAMDETKRRRTIQMKYNEEHHITPHTIIKPIQEA
ITVTKKATDETETDNSAEFTDKDFAKLDKEAQAKMLDELTEQMRSAAKRLDFEQAATLRD
TIMELKTKAKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgatttaccggcaaccagataaaaaatttgaactagtgtcagagtacaagccaaccggc
gaccagccccaagcaattaatcaattgacaaagggaattgaagatggtgaaaaagctcaa
atcttattaggggcaacaggaacaggaaaaacatttacgatctcaaatgtgatcgctaat
gtcaataagccaactttgattctttcccataataagaccttagctgggcaactctatggt
gaaatgaaaaaattcttccctcataacgcggttgaatattttgtttcctactatgactac
tatcaaccggaagcatatgttccatcaagcgatacttatattgaaaaagatgcgtcaatt
aatgatgagattgataagctgcggcactctgccaccacttccttgttggaacgaaatgat
gtaattgtcgttgcctctgtttctagtatttttggattaggagatcctcgtgaataccaa
aatagcgtcctttctttgcgtgttggtcaagagattgaacgtgatcgattgttgaccgaa
ctggttaatattcaattcgatcgcaatgatattgattttcaacggggacgtttccgcgtt
cgtggtgatgtagttgaaatctttccggcgtcgcgtgatgaacgggcattgcgggttgaa
ttcttcggggatgaaattgaccggattcgtgaagttgatgcgctgacaggcgaagtgatt
ggtgaccgggaccatgtttctatcttcccggcgactcactttatgactaatgaagaagtt
atggatcgggcattgccacaaattgaagctgatatgaagaaacaggtaaaaaagtttact
gatgagggaaagcttcttgaagcagagcggattcagcaacggacaacttatgatattgaa
atgatgcgtgagatgggctacaccaatggaatcgagaattattcgcgttatatggatggt
cgaaagcccggcgaacctccctataccttattagatttcttccctaaagatttcttatta
gttgttgatgaatcccaccaaaccatgccgcaagtacggggaatgtataacggggaccga
gcgcggaaacaaatgttaattgattatgggttccgcttaccgagtgcgcttgataatcga
ccattaaaactaccagaatttgaacaacatgttaatcaagttgtatatatgtctgcaact
ccgggcccatatgaaatggaacagacagaccacattgctcagcaaattattcgaccgact
gggttgcttgacccaacagttgaagttcgcccggtaatgggacagattgatgacctagtt
ggtgaaattaacaaacgtattgagaaaaatgaacgtgtttttgttacgaccctgacgaag
aagatgtccgaagaccttacggattatctaaaggatatggggttaaaggtcaaatacctt
catagtgatattaagactcttgaacggacgcaaatcattcgtgatctccgtcttggcaaa
tttgatgttcttgttggaattaacctcttacgggaaggcctagatgttccagaagtatcc
ttggtcgccattcttgatgccgataaggaaggctttttacgtaatgaacgttcccttatt
cagacgattggtcgagcggctcggaatgagaatggggcagtaattatgtatgctgatact
gtcactgactcgatgcaaaaggcaatggatgaaacaaagcggcggcggacgattcagatg
aaatacaatgaagaacatcatattacaccgcacacaatcatcaagccaattcaagaagca
attactgttactaagaaagcaacggatgaaactgaaacagataatagtgctgaatttact
gacaaagattttgcaaagttagataaagaggcccaagcaaagatgcttgatgaattaaca
gagcaaatgcgttctgctgctaaacgccttgactttgaacaggctgctacgcttcgtgat
acgataatggaattaaagacaaaagcaaaaaaatag
DBGET
integrated database retrieval system
