Limosilactobacillus reuteri I5007: LRI_1612
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Entry
LRI_1612 CDS
T02701
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lrt
Limosilactobacillus reuteri I5007
Pathway
lrt03030
DNA replication
lrt03430
Mismatch repair
lrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRI_1612
03430 Mismatch repair
LRI_1612
03440 Homologous recombination
LRI_1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrt03032
]
LRI_1612
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_1612
Enzymes [BR:
lrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRI_1612
DNA replication proteins [BR:
lrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRI_1612
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRI_1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
ZapB
AAA_24
AAA_19
AAA_assoc_2
AAA_14
AAA_7
AAA_16
AAA_2
DUF4466
VPS51_Exo84_N
CCDC92
Mg_chelatase
RNA_helicase
Cnn_1N
AAA_18
DivIC
DUF919
Motif
Other DBs
NCBI-ProteinID:
AGN99821
UniProt:
R9WIU4
LinkDB
All DBs
Position
complement(1650598..1652430)
Genome browser
AA seq
610 aa
AA seq
DB search
MSYQALYRVWRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAK
AVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRILA
EDAFNRMKYILDQKEVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLV
TGSVTKQLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPS
LISVESTGLKQEDFEEIVQLASSATLYQMIDELNSIQEEMRFTTHPDVYLEVLTIKLAQI
EPQKNIQSAPAVSADTNTEAIKTIEKLQQEIQQLQQTVKQLQNAPVKASRPSPRQQNEQP
RVQQKKVQVNLNKIYPVLENATRQDLINVRELWGDMLNLLSVPQRSLLHVSQPVAASAVG
IIVAFDYPFLFQQAADDTTLLENMESALQRLTGNERQVVFVPKDKWPKIRQDFIKDHGFG
KNQQKSQPTKKPQTTEESGQTPAATPAPMEEPPLPPEDEALTEEKSPQEDNQVATAQKLF
GSDIVKVEDN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggcattatatcgtgtctggcgaccacagcgattcgatgatcttgtcggt
caacagattgttacaagaaccctaaaaaacgccattatcactcaccagataagccatgca
tacttgttcgctggtccacgtggtactggtaaaacctcagcagcgaagatttttgctaaa
gcggttaattgtcatcactccaaggatggcgaaccgtgcaatgagtgtgagatttgtaaa
gcaattacgaacgggcaattaaatgatgtaattgaaatcgatgcggcttctaataatggg
gttgaagagattcgtgatattcgggataaggcaaaatatgcccctacccaagcggattac
aaggtttatataattgatgaggttcacatgctttcaacaggggcttttaatgcattgcta
aaaacgcttgaagaaccaccagccaatgtgatttttattcttgcaactacggaaccccat
aaaattcctttaacaattatttcgcgagttcaacgatttgattttcgacgaattttagca
gaagatgcatttaatcgaatgaaatatatccttgatcaaaaggaagttacttatgatgaa
aaagcattatgggtaattgcgaatgccgctgaaggaggaatgcgggatgcgttgagtatt
cttgaccaggtgctttctttcagtgataatgaggtaaagttggatgatgctttactagtt
acaggaagtgttactaaacagttattaaagaagtactttttggaaattagtaagcatgaa
ggggcaactgctcttgatactatgaaggatattttagatgaaggaaaagacggtcagcgg
ttcattgaggacttgatttcctttattcgtgatattctgttgtaccaagaatcaccaagc
ttgattagtgttgaaagtacaggtctaaagcaggaagactttgaagaaatagtccaactt
gcttcttcagcgaccttataccaaatgatcgatgaactaaatagtattcaagaagagatg
cgttttacgacccatccggatgtgtatttggaagttcttacaataaaacttgcacaaatc
gaaccacaaaagaatattcaatcggcaccagcagtttctgcggatacaaatactgaagct
attaagacgattgaaaaattacaacaagagatacagcaattgcaacaaacagtaaaacag
ttgcagaatgcgccggtaaaggctagtcgaccatcacctcgtcagcagaatgagcaaccg
cgagtacaacaaaagaaagtgcaggttaatctcaataagatttacccagtattagaaaat
gcgactcgtcaagatttaataaatgttcgtgagttatggggagatatgttgaacctattg
tcggtgccgcaacggtccttacttcacgtttcacaaccggttgccgctagtgccgtggga
ataattgttgcttttgattatccgttcttattccagcaagccgctgatgatacaacgttg
ttagagaatatggaaagtgctttgcaacgtttaactgggaatgaacggcaagttgttttt
gtacctaaggataagtggccaaaaattcggcaagactttattaaagatcatggttttggt
aagaatcagcaaaagtcgcaacctactaaaaagccacaaactactgaagaaagcggacaa
actcctgcggccacaccagcaccgatggaggaaccaccgctccctccagaagatgaggca
ctaactgaagaaaagtcacctcaagaagataaccaagtagcaacagcacaaaagctattt
ggtagtgatattgttaaagtagaagataattaa
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