Limosilactobacillus reuteri I5007: LRI_1887
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Entry
LRI_1887 CDS
T02701
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lrt
Limosilactobacillus reuteri I5007
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrt03016
]
LRI_1887 (trmE)
Transfer RNA biogenesis [BR:
lrt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LRI_1887 (trmE)
Prokaryotic type
Methyltransferases
LRI_1887 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
cobW
Roc
AAA_16
MMR_HSR1_Xtn
AAA_22
AAA_29
DUF3755
Motif
Other DBs
NCBI-ProteinID:
AGO00097
UniProt:
R9WJT0
LinkDB
All DBs
Position
complement(1943340..1944728)
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AA seq
462 aa
AA seq
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MANSENDTIAAISTPVGEGGISIIRISGDDAVKVAQRIYKGKDLAKVATHTINYGHIVDP
DTDQEVDEVMVSVMRAPHTYTREDVIEINCHGGLLATNRILQLVLSFGARIAEPGEFTKR
AFLNGRLDLSQSEAVMDLIRAKTDKSMKVALNQLDGDLSRLIRNLRQDILDVLAQVEVNI
DYPEYDAVEEMTTKLLKEKAEDIQQRIQGLLKTAKQGKVLRDGLATAIIGQPNVGKSSLL
NSLLHEDKAIVTNVAGTTRDVIEEYVNVNGVPLKLIDTAGIRDTNDQVEKIGVERSRKAL
GAADLVLLLIDSSNELTEEDHQLLEATKDKQRIIILNKTDLPRKVDLAELKSLAGKSAVI
ETSIVNHKGMDQLGEQIGHMFFNEGIESNQNNVMVTNARHIGLLHQANDALSDVLKGIND
GMPVDLVQIDMTRCWELLGEITGDSYQDELLDQLFSQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagcgagaatgatacgattgcagcaatttcgacgccggttggtgaaggtgga
atttccattatccgaattagtggggatgatgcggtgaaagttgctcaacgaatctacaaa
ggaaaagatctcgccaaagtagcaactcataccattaactatggtcatattgtcgaccct
gatacggatcaagaagtcgatgaagtgatggtttcagtaatgcgcgctcctcatacttat
acgcgtgaagacgtgattgaaatcaactgtcacgggggattgttagcaactaaccgtatt
ctgcaattggtattaagctttggcgcccggatagcagaaccaggtgaatttactaaacgg
gcctttttaaatggtcgtctcgatttatcccaatcagaagcggtaatggatttaattcgc
gcaaagacagataaatcgatgaaagttgcattaaaccagcttgatggtgatttgtcgcgg
ttaattcgtaatttgcgccaggatattttggatgtattagcgcaggtagaggttaatatc
gactatccagaatatgatgctgttgaagaaatgacgacgaagctcttaaaagaaaaagca
gaagacattcaacaacgaatccaaggccttcttaaaacagctaaacagggaaaggttctg
cgagatggtttagcaacggcaatcatcgggcagccaaatgttggtaaatcaagtttattg
aattccttgcttcacgaagacaaagcgatcgttacaaatgttgcggggacaacccgggac
gtaattgaagaatacgtcaatgtcaacggggtgccattgaagttaattgatacagcagga
atccgcgatacaaatgaccaagttgaaaagatcggggtagagcggagtcgcaaagccttg
ggggccgctgacttagtacttctcttgattgatagttcaaatgaattaactgaggaggat
catcaattactggaagcaaccaaggataagcagcggatcatcatcttaaataagacggat
cttccacgcaaggttgatttagcagaattgaaatcactagctggcaagagtgccgttatt
gaaacttcaatcgttaaccataaaggaatggaccaacttggtgaacagattggtcacatg
ttcttcaacgaggggattgaaagcaaccagaataatgtaatggttaccaatgctcggcac
attggcttactccaccaagctaatgatgctttaagcgatgtcttaaaaggaattaatgat
ggaatgccggtagacctggttcaaattgatatgacccggtgttgggaattattaggtgaa
attactggggatagttaccaagatgagttgcttgaccagttatttagtcaattctgttta
ggaaagtag
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