Limosilactobacillus reuteri SD2112: HMPREF0538_20059
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Entry
HMPREF0538_20059 CDS
T01551
Name
(GenBank) putative DNA sulfur modification protein DndD
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20059
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0538_20059
Archaeal homologous recombinant proteins
HMPREF0538_20059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
UDPGT
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AEI56273
UniProt:
F8DRN9
LinkDB
All DBs
Position
complement(58827..61928)
Genome browser
AA seq
1033 aa
AA seq
DB search
MHPLTIELHYFGPYEHQVIDFTQFTEHSLFLVAGNTGAGKTTIFDAMCYALFGQTTNDRD
RSAAALRSDFAPADQETMVKFTFEHQNLKYQIMRRPKQVLKGRRGNLVEHNQAVDLIYPL
ESDHPHEITKIKEVDTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKEVLLRDLFN
TSRYEQWATQLKNDLREQKKSLTAQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLSRLK
ANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKAGKTLQAQAGEIQETKQQ
VKVLDWYQEHQTKYQRWKDGEKRLQKLTADSNILHEDLRNLQKQQQTIETELQQTSKRQE
KIDHLQTEVADLTNKLPLFDDRDKLRSTVDELQANLKQQKKQQAAFQKKLQDAQQQLTVI
TNNLKEHENLGEVQVHIAKQEALQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGDAEK
LVQKSQGELNDLNDRFARHQIAILAQKLKPATPCPICGSLDHPHPASLADDGELVTEAQV
KAATVKAQQNRSRLDQLKEQVRQSVAQITNLTTEVETKQANLAELLGDNELPSDWEGQIE
NHAQKLAQMKNDLAKIEQQVKQWRQEEEELQQESKFSQEELDKIDESVNRCKQDLIAKQT
ILKEKAASLPAKFPTKEAADKQIQTDQLTIKAFNNQLESLQQQRQENAEKLAGTNSRIAQ
TKEELATQTTQQDNLHQYLMNLLAQYDVQLKWDFWQEASEQVATLSSLREQVTTFENQVQ
DNQSQQERLTKAINNHPMPDIASTQTKLNAEREQLRQCQQEIGQLTAQYKQLEGTDQKII
KAVVKTGKLDQEINELQTLTDVVTGNTENHVSLERYVLQAYFQDVLVAANVQLDRLTNGR
YQFELATESHGAGAKWSGLEVNVYDDNAGRTRSARTLSGGESFMASLALALALCQIVQEQ
SGGIKIDALFIDEGFGSLDQQALEDALHSLQELEGHRMIGIISHITELEEQIPDQLIVRS
RNGRSYVAYQHEI
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcatccattaacgattgaactacattactttgggccgtatgagcatcaagtgattgac
tttacgcagttcacagagcattccttatttctggtagcagggaatactggtgcggggaaa
accacaatttttgatgcaatgtgttatgcactttttggtcaaacaactaatgatcgtgat
cggtcggctgctgctttacgttctgattttgcaccagctgaccaagaaacaatggtgaag
tttacctttgaacaccaaaatcttaaatatcaaattatgcgtcgtcctaaacaggtttta
aagggacgtcgcggcaatttggttgaacataatcaagccgttgaccttatctacccactt
gaaagtgatcatccccatgaaattactaaaattaaggaagtagacacgtttattactgac
ctgctcaacctaacccgtgatcaatttaagcagattgttcttctccctcaaggaaaattt
cgacagtttcttgattcagatagcaatacgaaggaagttcttctaagagacctctttaat
acgtcccgttatgagcagtgggcaacgcaattaaaaaacgatttgcgcgaacagaagaag
tcattaacagcccaagaaacaaaacttcaatcattaaaggaaaccgtaaccgcgattgat
gcgcaattaaccactaaagaatggttagcagaagcaaaaaattacttatcccgactaaag
gctaatcttgaacacttgggcgatgatgagcagcaacagcaaaagaaagttgatcagctt
gatgcccaacttcatactgagcaagagttgaagaagaatattgaggagttagctgaactt
atcaaggctggaaaaacactgcaagctcaagcaggagagatccaagaaacaaagcagcaa
gtaaaagtccttgactggtaccaagaacaccagacaaaatatcaacgatggaaagatggc
gaaaagcgtctccaaaaattaacagcagacagtaatattctccatgaggacctgcgtaat
cttcaaaagcaacagcaaacaattgaaaccgaactacaacaaacgagcaagcggcaagaa
aagattgatcatcttcaaacagaagttgccgacttgacgaataaactcccattattcgat
gatcgagataaactaagatcaactgtcgatgaactacaagcaaacttaaagcaacagaaa
aagcaacaagctgctttccagaagaagttacaagatgctcaacaacaattgacggttatt
actaataatttaaaagagcatgaaaacttgggtgaggttcaagttcacatagcaaaacaa
gaagctcttcaggaaaaattaacgactgccggaaaagatttaaagcaattagaaacaaaa
cttttatctgaaaagaaaaattgcgcgaaattagagcaaaagcagggggatgctgaaaaa
ctcgttcaaaaatcgcaaggtgagttgaatgacttaaatgatcgctttgcccgtcaccaa
attgccattcttgctcaaaaattaaagccggccaccccttgcccaatttgtggatcactt
gaccacccccatccggcaagcttagcagatgatggtgaattggtaacggaagcgcaagtt
aaagcggcaaccgttaaagctcaacaaaaccgtagtaggcttgaccagttaaaagagcaa
gttcgccaaagcgttgcccaaattactaacttaacgacagaggtagaaaccaagcaggca
aatttagctgaactgttaggggataatgaattaccgagtgattgggaaggacaaatcgaa
aatcatgctcaaaaactagcacaaatgaaaaatgatcttgctaaaatagaacaacaggtt
aaacaatggcgccaagaagaggaagaattgcaacaagaatccaagttctctcaagaagaa
ttagataaaatagacgaaagtgtgaaccgctgtaaacaggatttaatcgccaagcagact
attctgaaagaaaaagcagcttctttaccagcaaaatttcctactaaagaagctgctgac
aagcaaattcaaactgatcaactaacgatcaaagcctttaataaccagcttgagtcatta
caacaacaacgacaagaaaatgccgaaaaattagcagggacaaatagtcgaatcgctcag
actaaagaagaacttgccacccaaacgacgcaacaggataacttacaccaatatcttatg
aaccttttagcgcaatatgatgtccagcttaaatgggatttctggcaagaagctagtgaa
caagtagcaacattgtcatcattacgtgaacaggtaacgacctttgagaatcaagtccag
gataatcagtcccaacaagagcggttgactaaggccatcaataaccatccgatgccagat
attgcatcaacgcagacaaaacttaatgctgagcgtgaacaacttcggcaatgtcagcaa
gaaattggtcagttaactgctcagtataagcaattagaaggaacggatcaaaagattatt
aaggcggttgtgaaaacaggaaaacttgatcaagaaattaatgaattacaaacattaaca
gatgttgtgactgggaatactgaaaaccatgttagcttagaacggtatgtattacaggca
tattttcaagatgtcttagtagcagccaatgttcagttagaccggttaactaatggtcgc
taccagtttgaattagcaacagaaagtcatggggctggtgccaagtggagtgggcttgaa
gttaatgtatatgatgataatgctggcagaacgcgaagtgcccggacgctttctggtggt
gaaagttttatggcttcacttgctcttgctttagctctctgccagattgtccaagagcaa
agtgggggaattaagattgatgcgctctttatcgatgaaggatttggttcccttgatcag
caagcccttgaagatgctcttcattcccttcaagaactcgaaggtcaccggatgattgga
attatcagtcatatcactgaactggaagagcaaattccagatcaattaattgttcgatca
agaaatggccgtagttatgtcgcataccagcatgaaatataa
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