Limosilactobacillus reuteri SD2112: HMPREF0538_20178
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Entry
HMPREF0538_20178 CDS
T01551
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0538_20178 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20178 (priA)
Enzymes [BR:
lru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0538_20178 (priA)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0538_20178 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND_NTPase5
AAA_30
PIF1
AAA_19
ATPase_2
DAP3
DUF5839
SLFN-g3_helicase
AAA_11
ADDB_N
IBR_1
NACHT
Zeta_toxin
Hint
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AEI56391
UniProt:
F8DKT6
LinkDB
All DBs
Position
complement(175674..178103)
Genome browser
AA seq
809 aa
AA seq
DB search
MPELAQVVVDVPTMQTNQPYTYQIPPKLEKQIQVGVRVIVPFGKGKRTVQGFVVALDNAS
QYEGELKPIQAIMDLQPVINPELMNLSKWLADTTYSFWISCLYTMLPNLLKAKTTRIIRI
VDEVDEHVAFDIFHGRDELEMAAVQDKPAILSKLFKLQKEGKITIEYQVEDRAKAKTVTG
IRSLLNFEQLEDERASLHANAHAQNRLLSYLQSIGSQVVKQKDAEHKTGLKAATFNQGQQ
KGWLEKTPVEVYRQPLAMQGTLDDAHLAAPLQLNADQQNAVNQINQAIDNHDPKVFLLQG
VTGSGKTEVYLQSIANALQQGKTALMLVPEISLTPQIVNRVRRRFGSKVAVLHSSLSNGE
RYDEWRRIERGEAQVVVGARSAVFAPLTNLGLIILDEEHESSYKQDESPRYQAREVAKWR
GKYNQAPVVLGSATPSLESRARAVKNVYHLLRLPHRVNKQELPPIEVVDMRDEIKKYGES
NFSQKLLTELNDRLQKNEQSILMLNRRGFSSFMMCRDCGNVLKCPNCDISLTLHMDTRTM
KCHYCGHEEPIPRECPNCHSHQIRYYGTGTEKVEQELHQLLPQARIIRMDVDTTRRKGMH
AKLLRQFGQHQADILLGTQMIAKGLDFPNVTLVGVLNADTGLGLPDFRASERTFDLLSQV
SGRAGRANKQGEVIIQTYNPDHYAIQDAKMHDYEKFFNQEMMLRRQASYPPYYYTVRLMA
SHPEEAKAAQAMADIYGRLKQGLLSSTVILGPTPRAIARMKRRYYYQIVIKYKKDPYLHQ
LLFDILQDTQSRGFKDVQVSIDPDPQYFM
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttggcacaggtagttgttgatgttccaacaatgcaaacaaatcaaccatat
acttatcagattccgccaaaacttgaaaaacaaattcaagttggagtaagagtgattgtg
ccttttggaaagggaaaacggactgttcaaggatttgttgttgcccttgacaatgcatcc
caatatgagggagaactcaaaccaattcaggcgataatggatcttcaaccggtaattaat
cctgaattaatgaatcttagcaaatggttagctgatactacttactctttttggatttct
tgcttatatacgatgttgcctaacttattgaaggctaagactaccagaattattcgaatt
gtagatgaagtagacgagcatgttgcctttgacatttttcatgggcgagatgaattagaa
atggcggcggtacaagataaaccggcaatcttaagtaaattgttcaaactgcaaaaggaa
ggaaagataacgattgaataccaagtggaggatcgagccaaagctaaaacggtgactggt
attcgctctttgcttaattttgaacaactggaagatgagcgcgcatcccttcatgctaat
gctcatgctcaaaaccgtcttctttcatacttacaatcaattggtagtcaagttgttaag
caaaaggatgctgaacataaaactggtttaaaagcagccaccttcaatcagggacaacag
aagggatggctagaaaaaacaccagttgaagtatatcgacaacccttggctatgcagggc
actcttgatgatgctcatttagcagcccccctgcagctcaacgccgatcaacaaaatgct
gttaaccagattaatcaagcaatcgacaatcatgaccctaaagttttcctcttacaagga
gttacggggagtggcaagacagaagtatacttgcaatcgattgctaatgctcttcaacag
ggaaagacagcattaatgcttgtgcctgagatttcattaacgccccagattgttaaccgt
gtgcggcgacgatttggctctaaggttgctgttttacatagtagtttatcgaatggtgaa
cgatatgatgaatggcgacggattgaacgtggagaagcgcaagtagttgtgggtgcccgt
tcagcagtctttgctccgttaactaatttagggctaatcattcttgatgaagaacatgaa
tctagttataaacaagatgaatcaccccgttaccaggcgcgtgaagtagctaaatggcgg
ggaaaatataatcaagcgcctgtagttcttggctctgctactcctagtctggagagtcgt
gcgcgagcagtaaaaaacgtttatcacttgttgcgtcttcctcaccgggtaaataaacag
gaactgccaccaatcgaagtggttgatatgcgagatgaaattaaaaagtacggggagagt
aacttttctcaaaaactattaaccgaattaaatgaccgcctgcaaaagaacgagcaaagt
attttaatgctaaatcgacggggattttcatcctttatgatgtgtcgtgattgtggaaat
gttttaaaatgtcctaattgtgatatttctttgacgctccatatggatacgcggacaatg
aaatgtcattattgtggtcatgaagaaccaatcccccgtgaatgtcccaattgccatagt
catcagattcgctattatgggactggaacagagaaggttgaacaagaattgcatcaatta
ttaccccaggcccggattattcgcatggatgttgataccacacggcggaagggaatgcat
gcaaaattattgcgacagttcggtcaacaccaagcggatattttattaggaacccagatg
attgcaaaagggcttgatttccctaatgttaccttagtaggggttttaaatgctgatact
ggtctaggcttaccagattttcgtgctagtgaacggacttttgatttgctaagtcaagtt
agcggtcgggctggtcgggcaaataagcagggggaagttattatccagacatataaccct
gatcattacgctattcaagatgccaaaatgcacgattacgaaaaattttttaaccaggaa
atgatgctacgaagacaagcaagttatccgccatactattacaccgttcgtttgatggcc
agtcatcccgaagaagccaaagcagctcaggcaatggcagatatctatggtcgcctaaag
cagggcttattatcttcgacggttattcttggccccactccgcgagcaattgcccggatg
aagcgtcgttactattaccaaattgtcatcaaatataagaaggatccttacttgcatcag
ctattgtttgatattcttcaggatacgcaaagtcgcggttttaaggatgtccaagtaagt
atcgatccagatccacagtattttatgtaa
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