Limosilactobacillus reuteri SD2112: HMPREF0538_20187
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Entry
HMPREF0538_20187 CDS
T01551
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF0538_20187 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20187 (xseB)
Enzymes [BR:
lru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF0538_20187 (xseB)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF0538_20187 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CENP-K
Prefoldin_2
KxDL
Acetyltransf_11
SKA1
DUF5343
DUF6687
Nif11
DUF1657
Motif
Other DBs
NCBI-ProteinID:
AEI56400
UniProt:
F8DKU5
LinkDB
All DBs
Position
complement(184842..185123)
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AA seq
93 aa
AA seq
DB search
MATAKPTFEEQLAQLQQIVNHLEQGNVPLEEALQQFQEGIKLSKELQTKLTNAEKTLGHL
IDDNGDEQVYEKQTDDPSNNGGGNRGFGSTDEQ
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaaaaccaacatttgaagaacaattagcacaattacaacagatcgttaat
caccttgaacaggggaatgtgccactagaagaagcccttcaacagtttcaagaaggaatc
aagctttctaaggaattacaaacgaagctaacaaatgctgaaaaaacgcttggtcactta
attgacgataatggtgatgagcaagtctacgaaaaacaaaccgatgacccaagcaataat
ggcggtggtaaccgtggatttggtagcactgatgaacaataa
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