Limosilactobacillus reuteri SD2112: HMPREF0538_20221
Help
Entry
HMPREF0538_20221 CDS
T01551
Name
(GenBank) penicillin-binding protein, transpeptidase domain protein
KO
K21465
penicillin-binding protein A
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru00550
Peptidoglycan biosynthesis
lru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0538_20221
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lru01011
]
HMPREF0538_20221
Peptidoglycan biosynthesis and degradation proteins [BR:
lru01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HMPREF0538_20221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEI56434
UniProt:
F8DL58
LinkDB
All DBs
Position
complement(210569..212668)
Genome browser
AA seq
699 aa
AA seq
DB search
MKENYKTVKFFDRIMNLFGSRTKKRQNAQSIIPFRLNMLLWIVGILLLALTIRLFYLQVL
QGTSFKAEVKRSDTTTQTNNVQRGMVYDSQGNVLVGNQTHQAITYTKGANVTTDQLYQIA
NRLGKYVSVSNKNSRLTDRNEEDYYLADKERLKSVLKHVKTSDVDSEDTKYNKALEYLSK
HPDSWELTDQQKNNARIYAAMSGAYSLSTTYIKETGVSAKELAAVGEHLNEMPGVKIGTS
WTRNYPQGTDIQSLTGTVSTTGLPSDEVNSLLAQGYSRNDSVGQSYLEKQFQSTLAGSKS
QTEVTTNGNDVTKEKTKYPGKKGDNLVLTINSKFQKQVQSILKNNYSAAGNQYSTGVYAV
VMNPNTGAIYAMAGIDRDPATGKETPDEIGAINHPITMGSVVKPAMVMGALMDGVITPTN
NTLTDMPIKLAGTSSKGSWFNHGGSANMAINAATALEVSSNSYMMQLLMKEAGMKYTPNA
QITMKPSIFAKARGYFNMFGLGVKTGIDLPGETSGYTGPADQKHIGSALDLSYGNYDGYT
LIQLAQYMSTIANGGTRMRPYIVKEIRGTKANGQLGAVEYTTKPQVQLTIPASKADFDVV
KQGLYQVVHGSNRYVTGKALASVKPSVSGKTGTAETYYKSHSTTTLSFAGFAPSDNPQVV
VALVIPGASNSDGGANLTMAKQIFEAYWKTVQSPKGFGD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaattataaaactgtgaaattctttgatcgaataatgaacttgtttggttca
cgtaccaaaaagcgtcaaaatgcgcagtcaattattccattccggctgaacatgctatta
tggattgttggtatcttgttattagcgttaactattcgactgttttatcttcaagttctg
caaggaacatcatttaaagcggaagtaaagcgatcagatacaacaacgcagacgaataat
gtacaacgggggatggtttatgattcacaagggaatgttcttgttggtaatcaaactcat
caagccattacctatactaaaggagctaatgtaactactgatcagctctatcagattgct
aatcgtttaggaaaatatgtgtctgtttctaataaaaattcgcgcttaactgatcgaaat
gaagaggattattaccttgctgataaagagcggcttaagagtgttttgaaacatgtcaag
acttcagatgtcgattctgaagatactaaatataataaagctctcgaatatttgagcaag
catcctgattcatgggaacttacagatcagcaaaagaataatgcccgaatttatgcagca
atgagtggagcatattccctttcgacaacttatattaaagaaacgggtgttagtgctaaa
gagcttgcagcagttggagaacacttgaatgaaatgccaggggtaaagattggaacgtct
tggactcgtaattacccccaaggtacagatattcaatcgttaacaggaactgtctcaact
actggtttaccaagtgatgaagttaactcattgcttgctcaaggatattctcgaaatgat
agcgttggacaaagttatctggaaaaacagttccaatcaactttagctggttcgaagtca
caaactgaagttactactaacggaaatgatgtaactaaagaaaagactaagtaccctggt
aagaagggtgataaccttgtattaacgattaattcaaaattccaaaagcaagttcaatcg
attttgaaaaacaattactcagctgccggaaaccagtattccactggggtatatgcagta
gtaatgaatccaaataccggtgcaatttatgcgatggcaggaattgaccgtgatccagca
acaggtaaagaaacccctgatgaaattggtgctatcaaccacccaattacgatgggttca
gttgtaaagccggcgatggtcatgggggcattaatggatggtgtaattacgccaacaaat
aataccttaaccgatatgccaattaagcttgccggaacttcatctaagggatcatggttt
aaccatggtggatcagcaaatatggcaattaatgcagcaacggcgctcgaagtttcttcc
aactcttatatgatgcaactactcatgaaagaagcaggaatgaaatatacaccaaatgcg
caaattacgatgaagccaagtatttttgctaaagcgcggggttacttcaacatgtttgga
ctaggggttaaaactggaatcgacttgcctggtgaaacaagcggttatacaggacctgct
gaccaaaagcatatcggttcagcacttgacttgtcatatggtaactatgatggttatact
ttgattcaacttgcccaatatatgtctactattgctaacggtggtacccggatgcgccca
tacattgttaaagaaatccgtggtacgaaagccaatggtcaacttggtgccgttgaatat
acaacaaagccccaagttcaattaaccattcctgcttctaaagctgactttgatgtcgtt
aaacaagggctttatcaagtggttcatggttctaaccgttatgttactggtaaagcgttg
gcatctgttaaaccatcagtatctggtaagacagggactgccgaaacctactacaagtcg
cactcaacaactacgctaagttttgctggatttgcgccatctgataatccacaagttgta
gttgctttggttattccaggagcttcaaattccgatggtggtgccaacctgacaatggca
aaacaaatttttgaagcctactggaagactgttcagagtcccaagggtttcggtgactaa
DBGET
integrated database retrieval system
