Limosilactobacillus reuteri SD2112: HMPREF0538_20261
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Entry
HMPREF0538_20261 CDS
T01551
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03030
DNA replication
lru03410
Base excision repair
lru03420
Nucleotide excision repair
lru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0538_20261 (polA)
03410 Base excision repair
HMPREF0538_20261 (polA)
03420 Nucleotide excision repair
HMPREF0538_20261 (polA)
03440 Homologous recombination
HMPREF0538_20261 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lru03032
]
HMPREF0538_20261 (polA)
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20261 (polA)
Enzymes [BR:
lru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0538_20261 (polA)
DNA replication proteins [BR:
lru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HMPREF0538_20261 (polA)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HMPREF0538_20261 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0538_20261 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEI56474
UniProt:
F8DL98
LinkDB
All DBs
Position
complement(247201..249867)
Genome browser
AA seq
888 aa
AA seq
DB search
MTKQLLLIDGNSIVFRAFFAMHNQMDKFTNKDGLHTAAIYGFKLMLDHVLQNFKPDTALV
AFDAGKVTFRTKMYDDYKGGRNKTPNELTEQIPYVRELIKDSGLHSYELANYEADDIIGT
LAKQADDAGYKTLIVTGDRDLTQLASENTTVAVTHKGVTDTEHYTPAHVEEKLGITPRQI
IDMKALMGDSSDNYPGVTKIGEKTAIKLVKQFGSVEELYDHIDDLKKSKMKEHLIEDEEI
ARQCKTLATILRDAPLKIGLDDLQYQGPQTDDLIKFYKEMGFKSFLKKMDIDGAGEEDEA
EIAPIDYTVLTKDNLDELGQLTGEVSFYLEMPAENYHTSPFAGFVIGNEGHWFTSRDVDL
LKEAPLKDLLQSDSVKKNVFNAKAQIVGLHRLGIPLENINFDLLLASYLLNTNDNSNDLG
QVAQEHGYDDVRTDEEVYGKGAKRAVPDDDETFFSHLATKARAIEHLRKDFFAKLDENKQ
TPLYTDIELPLTRVLAKMEIAGVHVDAQTLKDMGSKLTERLSEIESQIYQEAGEEFNINS
TKQLGHILFEKLKLPVIKKTKTGYSTAVDVLEKLADKSPIVEQILEYRQIAKLQSTYITG
LLKVIHSNDQKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLPEGRLIRKAFVPSHEGWQIF
SSDYSQVELRVLAHITGDKNLQEDFKNGEDIHASTARRIFHLAPDAEIDRNMRRRAKAVN
FGIVYGISDYGLAQRIHVSRAEAHEFIQNYFHEFPGVKKYINDTIAFAKENGYVETITHR
RRYLPDIHAKSFSKRSFAERTAMNTPIQGSAADIIKIAMIRMQDELEKRHLKAKMLLQIH
DELVFEAPKEEIPILSELVPKVMDSAVKLDVPLKVDSKYGDTWYDLKK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaattattgttaattgacggaaatagtattgttttccgggcattttttgcc
atgcataaccaaatggacaagtttacaaataaggacggcttgcatacggctgcaatttat
ggctttaagttgatgcttgaccatgtgttgcaaaactttaaaccggatacggctttagta
gcctttgatgcagggaaggtaaccttccggacgaaaatgtatgatgactataagggtggt
cgaaacaagacgcctaatgaattgaccgagcaaatcccttatgtgcgtgaattgatcaaa
gactctgggttacatagttatgaattagctaactatgaggctgacgatattatcggtact
ttggctaagcaggcggatgatgctggctacaagacgttgatcgtaactggagatcgggac
cttacccagttagcaagtgaaaatacaaccgttgccgttacccacaagggagttactgac
acggaacactatacgccagcgcatgtcgaagaaaaattaggaattaccccacgccaaata
attgatatgaaggcattgatgggtgattcttccgataattatcctggtgtaactaaaatt
ggagaaaagacggcgatcaaacttgtgaaacagtttggttcggttgaagagctttatgac
catattgatgacctcaaaaagagtaagatgaaagaacatttgattgaggatgaagagatt
gctcgccaatgtaagacgttagcgacaattcttcgggatgctccgctcaagattggccta
gatgatttgcaataccaaggtccacaaacggatgacttgattaagttttacaaagagatg
ggctttaaatctttcttgaaaaagatggatatcgatggggctggagaggaagacgaagct
gagattgctccaattgactacacagttttaactaaagataacttagatgaactaggacaa
ttaacgggtgaagtaagtttttaccttgaaatgccagcagaaaattaccacacgtcacca
ttcgctggttttgtgatcggcaatgaaggacactggtttacgagtcgagatgtggacctg
cttaaagaggcgcctctcaaggatttactccagagtgatagtgttaagaagaatgtcttt
aatgccaaggcacaaatcgttggacttcatcgcctcggtattccgcttgaaaatattaat
tttgatctgcttttggcatcttaccttctaaatactaatgacaatagtaacgacctggga
caagtagctcaggaacacggttatgatgatgtacgaacagatgaggaagtttatggtaaa
ggtgctaagcgtgctgtgcctgatgatgacgagaccttctttagtcacctggctacgaaa
gcgcgggcaattgaacatctgcgtaaggatttttttgccaaattagatgaaaataagcaa
acgccgctatataccgatattgaattaccgctaacccgggttcttgcaaaaatggaaatc
gcgggtgtccatgtagatgcacaaactttgaaagatatgggtagtaaattaactgaacgg
ctatcagaaattgaaagtcagatctatcaagaagctggcgaggaatttaacattaactcc
actaagcaactaggccatattctgttcgaaaaattgaaattgccagtgatcaaaaagacc
aagaccggttattccactgcagttgatgtgctggaaaagttagctgataagtcaccgatt
gttgagcaaattttggaatatcgtcaaattgctaagcttcaatctacctatatcactggt
ttgctgaaagttatccattcaaatgaccagaagatccatacgcgctacttacagacatta
acgcaaactggtcgcttgtcttctgttgatcctaacctgcaaaatattccagtacggttg
ccggaagggcgcttaatcagaaaggcatttgttcctagtcatgaaggttggcaaatcttc
tcttcagattattcgcaagttgaattacgggttcttgctcacatcactggtgacaagaac
cttcaggaagactttaagaatggtgaagatattcatgctagtacagctcgccgaattttc
catctagcccctgatgccgagattgaccgtaatatgcggcgtcgggcaaaagcagttaat
tttggaattgtttacgggattagtgattacggactggcacaacggattcatgttagtcgt
gcagaagctcatgaatttattcaaaattatttccatgaattccccggtgtaaagaaatac
atcaatgacacaattgcgtttgctaaagaaaatggttatgttgagacgattactcaccgt
cgtcgttacttaccagatattcatgccaaaagttttagcaagcgatcatttgcagagcgg
actgcaatgaatacgccaattcaggggagcgctgctgatatcattaagattgcgatgatc
cggatgcaagatgagcttgagaaacgccatctaaaggcaaaaatgctcttgcagattcat
gatgagttagtctttgaggctccaaaggaagaaatcccgattctatcggaattggtgcca
aaagtaatggattcggccgttaagttggatgtgccacttaaagtagatagtaagtatggg
gatacctggtatgaccttaaaaaatag
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