Limosilactobacillus reuteri SD2112: HMPREF0538_20552
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Entry
HMPREF0538_20552 CDS
T01551
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03420
Nucleotide excision repair
lru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0538_20552 (pcrA)
03430 Mismatch repair
HMPREF0538_20552 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20552 (pcrA)
Enzymes [BR:
lru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0538_20552 (pcrA)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0538_20552 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HMPREF0538_20552 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
FWWh
DUF4279
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEI56764
UniProt:
F8DMZ0
LinkDB
All DBs
Position
complement(543929..546202)
Genome browser
AA seq
757 aa
AA seq
DB search
MNNGQALLEGMNDKQSEAVLTTEGPLLVMAGAGSGKTRVLTHRVAYLIEENGVLPWNILA
ITFTNKAAREMKERVGKLLGESANEIWVSTFHALCVRILRRDIEKIGYNRAFTIADTSEQ
RTLMKRICAELNIDTKKFDPRSILSAISNAKNALLTPDDYSKEANSMFENMVARAYKLYQ
QELETNQALDFDDLIMKTIELLESDQETLEFYQDKFHYIHVDEYQDTNDAQYRLVNLLAQ
KYQNLCVVGDADQSIYGWRGANMNNILNFEHDYPQAKTVMLEQNYRSTQTILNAANEVIA
NNLYRKKKNLWTENGQGDKISYYRAQNEHDEAQFIVSKIKEEQEKHGYHFNDFAILYRTN
AQSRMVEETFLKSSIPYTMVGGHKFYDRREIRDILAYLTLIVNPADSMSFERVVNTPKRG
IGLTSVEHLRNFANENGWTLLKAAQNVDTASEITARTRNKIDEFGQLMANLTKQAEYLTL
TDLTEQILELSGYNKMLSDDRSLEAQARRENLDEFKSVTQEYDEQHKDDDDPNLQKIINF
LADLALVSDQDDVDEQAPAVTLMTLHAAKGLEFPVVFLVGMEEGIFPLSRALMEDDELEE
ERRLAYVGITRAKKKLYLTNAFSRLLYGRIQRNQPSRFVEEIDSELLQFENSPSGNSIKD
SKLPFDRAAATATTYRDQQKRTYRSAGKRVKPITNTGTGADKVGWKTGDKVEHKKWGQGT
VVKVNGSGNDMELDIAFPSQGVKRLLASFAPITKVQK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacgggcaagcattattagaaggaatgaatgataagcaatccgaagcagtatta
actacagagggaccattattagtaatggccggtgctggatcaggaaagacacgggttctt
acacaccgggttgcttacttaattgaagaaaatggtgtattaccatggaatattttagcg
attacttttaccaacaaggctgcgcgcgaaatgaaagagcgggtcggtaaattacttggt
gaaagtgctaatgagatttgggtatcgacttttcacgcattatgtgttcgaatcctccgt
cgtgatattgaaaaaattggctataatcgcgcctttacgattgctgatacaagtgagcaa
cggacgttaatgaagcggatttgtgcagaattaaatattgatactaaaaaatttgatccc
cgcagtattttaagtgcgatttctaatgctaaaaatgctttgttgacgccagatgactat
agcaaagaagctaatagtatgtttgaaaacatggtcgcgcgagcatataagctttaccaa
caagagctagaaactaatcaagcattagattttgatgatctgattatgaagaccattgag
ttattggaaagtgatcaagagacgcttgaattttatcaagataagttccactacatccat
gttgacgaataccaggatacgaatgatgcccaataccggttagttaatctattagcgcaa
aagtaccaaaatttgtgtgtggtaggggatgcagatcagagtatttatggttggcgtgga
gctaatatgaacaatattttgaattttgaacatgattatccccaagctaagacggtaatg
cttgagcaaaactatcgatcaacgcaaacaattttaaatgcggcaaatgaagttattgct
aataacctttatcgaaaaaagaagaatctgtggacagaaaatggtcaaggggacaaaatt
tcgtattaccgcgcgcaaaatgaacatgatgaagcgcagtttattgtttcgaagattaaa
gaagaacaagaaaagcatggctatcactttaatgactttgcaattctttatcggactaat
gcacaatcacggatggttgaagaaactttcttgaagagtagtattccctatacgatggtt
ggtggccataaattctatgaccggcgtgaaattcgtgatattttagcatatttgacctta
atcgttaatcctgccgattcaatgagctttgaacgagttgttaatacgcccaaacgagga
attggtttaactagtgtggaacatcttcgcaatttcgctaatgaaaatggctggacatta
ttaaaggcagctcaaaatgttgatactgctagtgaaattactgcacgaacacgaaataaa
attgatgaatttggtcaattaatggctaacttgactaaacaagcagaatatctcacatta
actgatttaactgaacagattttagagttaagtggctacaacaaaatgctaagtgatgat
cgaagccttgaagcacaagctcgtcgtgaaaaccttgatgaatttaagtcggttacacaa
gaatatgatgagcagcataaagacgatgatgatcctaacttgcaaaaaattattaacttt
ttagctgatttggcccttgtctcagatcaagatgatgttgatgaacaagcaccagctgta
actttaatgacattacatgcagctaagggacttgaatttccagttgttttccttgtggga
atggaagaaggtattttcccattatcgcgagctttaatggaagatgatgaattggaagaa
gaacgtcgcttagcctatgttggaattacacgggcaaagaaaaagctttatcttactaat
gccttttcacgtttactttatggtcgtatccagcgtaaccaaccatcacgatttgtagaa
gaaattgattctgagttgttacagtttgaaaatagcccatcaggtaatagcattaaagat
agtaaactgccatttgatcgtgctgccgcaaccgctactacctaccgtgatcagcaaaag
cgaacatatcgcagtgctggcaagcgggttaaaccaattactaacaccggaactggggcc
gataaggttggctggaaaactggcgataaggttgaacacaaaaagtggggccaaggaaca
gtggtcaaagttaacggtagtggtaatgatatggaattagatattgcctttccaagtcag
ggtgtaaagcggttattggcaagttttgccccaattacgaaagtacaaaaataa
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integrated database retrieval system
