Limosilactobacillus reuteri SD2112: HMPREF0538_20643
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Entry
HMPREF0538_20643 CDS
T01551
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0538_20643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20643
Enzymes [BR:
lru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF0538_20643
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0538_20643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEI56855
UniProt:
F8DND6
LinkDB
All DBs
Position
complement(628796..629449)
Genome browser
AA seq
217 aa
AA seq
DB search
MIAEYPPTLLAEVKEKTKDRQLTGFTPGQGPLNPDLMLVGEAPGRYEEKVNIPFSGASGQ
ELMKLIESIGYSRSTVYITSVVRQRPYSIKKAIDKKTGEVIEKRPNRTPTKKEVLAFAPL
FDWELAQVKPKIIVTLGNTALQRLLGSQANIGKLHGQLLHEKIQRTNDAHDGYELTTDKH
WIMPMYHPAAVLYARRLEPTIKADWQRLGQDIKKMKK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaatatccgccaacgctactggcagaggtaaaagaaaaaacgaaggatcgg
caattaacaggttttactccaggtcaaggaccgcttaatccagacttgatgttagtagga
gaggctcctggtcgttacgaagaaaaggtaaatattcctttttctggtgcttccggtcag
gaactgatgaaattgattgaatcaatcggatactcgcgttcaaccgtttatattactagt
gtagttcgtcaacggccttatagtattaagaaggcaattgataagaagacaggtgaagta
attgaaaaacggcctaaccggacgccaactaaaaaagaagtcttagcatttgctcctttg
tttgattgggaactggctcaagttaagccgaaaattattgttacgcttggcaatacggct
ttacaacggctgcttggtagtcaggccaatattggtaagcttcatgggcaacttctccac
gaaaagattcaacggactaatgatgcgcatgatggttatgagttgacgactgataagcat
tggattatgccgatgtatcatccggccgcagtactctatgcccgccgattggagcctact
attaaagctgactggcaacggttagggcaggacattaagaaaatgaaaaaataa
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