Limosilactobacillus reuteri SD2112: HMPREF0538_21147
Help
Entry
HMPREF0538_21147 CDS
T01551
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lru03016
]
HMPREF0538_21147 (trmE)
Transfer RNA biogenesis [BR:
lru03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HMPREF0538_21147 (trmE)
Prokaryotic type
Methyltransferases
HMPREF0538_21147 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
GTP_EFTU
Ras
Roc
MMR_HSR1_Xtn
cobW
AAA_16
AAA_22
AAA_29
DUF3755
Motif
Other DBs
NCBI-ProteinID:
AEI57357
UniProt:
F8DR34
LinkDB
All DBs
Position
complement(1122527..1123960)
Genome browser
AA seq
477 aa
AA seq
DB search
MHGLALFLLERSKVAMANSENDTIAAISTPVGEGGISIIRISGDDAVKVAQRIYKGKDLA
KVATHTINYGHIVDPDTDQEVDEVMVSVMRAPHTYTREDVIEINCHGGLLATNRILQLVL
SFGARMAEPGEFTKRAFLNGRLDLSQSEAVMDLIRAKTDKSMKVALNQLDGDLSRLIRNL
RQDILDVLAQVEVNIDYPEYDAVEEMTTKLLKEKAEDIQQRIQGLLKTAKQGKVLRDGLA
TAIIGQPNVGKSSLLNSLLHEDKAIVTNVAGTTRDVIEEYVNVNGVPLKLIDTAGIRDTN
DQVEKIGVERSRKALGAADLVLLLIDSSNELTDEDRQLLEATKDKQRIIILNKTDLPRKV
DLEELKSLAGKSAVIETSIVNHEGMDQLGEQIGHMFFNKGIESNQNNVMVTNARHIGLLH
QANDALSDVLKGINDGMPVDLVQIDMTRCWELLGEITGDSYQDELLDQLFSQFCLGK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcatggactagcactttttttgttagaaaggagtaaagtagcgatggcaaatagcgag
aatgatacgattgcagcaatttcgacaccggttggtgaaggtggaatttccattatccga
attagtggggatgatgcggtgaaagttgctcaacggatctacaaaggaaaagatctcgcc
aaagtagcaactcataccattaactatggtcatattgttgaccctgatacggatcaggaa
gttgatgaagtgatggtttcagtaatgcgcgcgcctcacacttatacgcgtgaagacgtg
attgaaattaactgtcacgggggattgttagcaactaaccgtattctgcaattggtactg
agctttggcgcccggatggcagaaccaggtgaatttactaaacgagccttcttaaatggt
cgtctcgatttatcccaatcagaagcagtaatggatctaattcgtgcaaagacagataag
tcgatgaaggttgcattaaaccaacttgatggtgatttgtcgcggttaattcgtaattta
cgacaagacattttggatgtattggcacaggtagaggttaatattgattatccagaatat
gatgctgttgaagaaatgacgacgaaactcttaaaagaaaaagcagaggacattcaacaa
cgaatccaaggccttcttaaaacagctaagcaaggaaaggttttgcgagatggtttagca
acggctatcatcgggcagccaaatgttggtaaatcaagcttattgaattccttacttcac
gaagacaaggcaatcgttacaaacgttgctgggacaacccgggacgtaattgaagaatat
gtcaatgtcaacggggtgccattgaagttaattgatacagcaggaatccgcgatacaaat
gaccaagttgaaaagatcggggtagagcggagtcgcaaagctttgggcgccgctgactta
gtacttctcttgattgatagttcaaatgaattaactgacgaggatcgccaattacttgaa
gcaaccaaggataagcagcggatcatcatcttaaataagacggatcttccacgcaaggtt
gatttagaggaattgaaatcactagctggcaagagtgctgttattgaaacttcaatcgtt
aatcatgaaggaatggatcaacttggtgaacagattggtcacatgttcttcaacaagggg
attgaaagcaaccagaataatgtaatggttacaaatgctcggcacattggcttacttcac
caagctaatgatgctttaagcgatgtcttaaaaggaattaatgatggaatgccggtagac
ctggttcaaattgatatgacccggtgttgggaattattaggtgaaattactggggatagt
taccaagatgagttgcttgaccagttatttagtcaattctgtttaggaaagtag
DBGET
integrated database retrieval system
