Limosilactobacillus reuteri SD2112: HMPREF0538_21157
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Entry
HMPREF0538_21157 CDS
T01551
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lru03032
]
HMPREF0538_21157 (gyrA)
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_21157 (gyrA)
Enzymes [BR:
lru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0538_21157 (gyrA)
DNA replication proteins [BR:
lru03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0538_21157 (gyrA)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0538_21157 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEI57367
UniProt:
F8DR44
LinkDB
All DBs
Position
1133126..1135615
Genome browser
AA seq
829 aa
AA seq
DB search
MAEQDMPNRITDVNLTSQMKNSFLDYAMSVIVSRALPDVRDGLKPVQRRILYGMNELGVT
PDKPYKKSARIVGDVMGKFHPHGDSSIYEGLVRMAQDFSYRYMLVDGHGNFGSVDGDGAA
AMRYTEAKMSKIAVEMLRDINKNTVDFHDNYDGTEKEPDVLPARFPNLLVNGASGIAVGM
ATNIPTHNLGEVINGLHMLMNNPDITTEGLMKAIPGPDFPTGGVVMGKSGIRKAYETGRG
TIIVRAKVDIEEQKNGKQRIIVHEIPYMVNKAKLIERIAELARNKDIDGITDVNDETDRD
GMRIVIDVRRDASAEVILNNLYKMTLMQTTFNFNMLAIVNGAPKILSLKQILQYYLEHQE
SVVRRRTEFELKKAQNRAHIVAGLRIALDHIDEIINIIRNSQTSEVAKNELMNNYGLSDR
QAQAILDMRLVRLTGLEREKIEDEYQKLMAAIADYKDILAHRERINQIIYDELMEIQKRF
GDERRTELQVGDITNIEDEDLIEEEDIIVALTHNGYIKRLPVDEFKSQHRGGRGVKGMGV
HKDDFIEQLISSSTHDMLLFFTNSGKVYSMKGYEVPEYGRAAQGIPIINLLGINNKEKIS
AVINVSHETNDDDKYLFFTTKLGTVKRTAVTEFKNIRSNGLKALNLHENDELIDVEVISE
DQPMIIGTHNGYALSFKSSVVRSMGRSAAGVRGIRLRDEDYVIGAAPLNSDSKVLVISEN
GFGKQTPASEYPIKGRGGLGVKTVNVTVKNGPLVGLTTVNGDEDIMLVTDQGVIIRFGIE
SVSQTGRSAVGVHLIKMDNGARVATIAKVDKEVDEETEEVTNNSSQEEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaacaagatatgcctaatcggatcacggatgtaaatcttacgagtcagatgaaa
aactcattcttggattatgcaatgagtgttattgtttcacgtgcgcttccagacgtccgt
gatggattaaaaccggtacaacgccggattctatatggaatgaatgaattaggggttact
cccgataagccttacaagaagtcagcccggattgtcggggatgtaatgggtaagttccac
ccacatggtgactcttcaatttatgaaggacttgtgcggatggctcaagactttagttat
cgttacatgcttgttgatggtcacggtaacttcgggtcagttgatggtgatggagcggcc
gccatgcgttataccgaagcaaagatgagcaaaattgcagttgaaatgcttcgggatatc
aataaaaataccgttgatttccatgataactatgatggtactgaaaaagaaccggatgta
ttaccagctcgttttcctaatttattagttaacggtgcctcagggattgccgtggggatg
gctactaatattccaacccataatttaggtgaggttattaatggcctgcatatgttaatg
aataaccctgatattacaacggaaggactaatgaaggctattcctggtcccgactttcca
actggtggagtagtaatgggtaagtccggtattcgtaaagcttatgaaaccggtcgggga
actattattgttcgagcaaaagttgatattgaagaacagaagaatggtaagcaacggatc
attgttcacgaaattccatacatggttaataaggcaaagttaattgaacgaattgctgaa
ttagctcggaataaagatattgatggaattactgatgttaacgatgaaactgaccgtgac
ggaatgcgaatcgtaattgatgttcgtcgtgatgccagtgctgaagttatcttgaataat
ctttacaagatgaccttgatgcaaacaacttttaacttcaatatgctagcaattgttaat
ggggctccaaagattttaagcttgaaacaaatcttgcaatattatctggaacaccaggaa
tcagttgtacggcggcgaacggaatttgaattaaagaaagcccagaatcgtgcgcacatt
gttgccggattgcggatcgctttagaccatattgatgagataattaatattattcgtaat
tcacaaacaagtgaagtagcgaaaaatgagttgatgaataattatggtttatcagatcga
caggctcaagctatcctcgatatgcggttagttcggttgaccggtctagaacgggaaaag
atagaggatgaataccaaaaattaatggcagcaattgctgattacaaggatattcttgct
catcgtgaacggatcaatcaaatcatttatgacgaattgatggaaattcaaaaacgtttt
ggagatgaacggcggactgaacttcaagttggtgatattaccaatattgaagatgaagac
ttaattgaagaagaagatattatcgttgccttgacccacaatggatacattaaacgtctt
ccagttgatgaatttaagtctcagcatcgtgggggtcgtggtgttaagggaatgggagtt
cataaagatgattttattgaacaactaatttctagctcaactcatgatatgttgctcttc
tttactaattcaggaaaagtatactcaatgaaagggtatgaagttcctgaatatggtcgg
gctgcgcagggaattccaattattaacctgcttggaattaataataaagagaagattagc
gctgttatcaatgtttcacatgaaactaacgatgatgataaatacctcttctttactact
aagctaggaacagttaaacggacagcagtaacagagtttaagaatattcgaagtaatgga
ttaaaggcgcttaatctccatgaaaacgatgaattgattgatgtagaagttattagtgaa
gatcagccaatgattattggtactcataatggatatgctcttagctttaaatcatcagtt
gttcggtcaatggggcgaagcgcggctggagttcgtgggattcgtttacgagatgaagac
tacgtaattggcgctgcccctcttaattctgatagcaaggtacttgtaattagtgaaaat
ggttttggaaagcaaactcctgcttctgaatacccaatcaaaggccggggcggattagga
gttaagacagttaatgttactgtaaagaatggcccgctggttggtttaacgactgtcaat
ggtgatgaagatatcatgttagtgaccgaccagggagtaattattcgttttggcattgaa
agtgtatcgcaaactggacgatctgcggttggtgttcacttaattaagatggataatggt
gcccgtgttgctacgattgcaaaggtggataaagaagtcgatgaggagactgaagaagta
actaataattcctcacaagaagaaaattaa
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